| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21311 |
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| Symbol | rplT |
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| ID | 4780890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1789338 |
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| End bp | 1789685 |
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| Gene Length | 348 bp |
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| Protein Length | 115 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640085428 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_001015951 |
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| Protein GI | 124026836 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.105631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCG TTAAAAGAGG TAATGTTGCG AGAAAACGTA GAAACAAAAT CCTTCGCTTA
GCGAGAGGAT TTCGAGGAGG TAATGGAACT CTTTTTCGAA CCGCAAATCA AAGAGTAATG
AAAGCCCTTT GTAACGCATA TAGAGACAGA AGAAGAAGAA AACGTGATTT CAGGAGACTT
TGGATTGCAA GAATCAATGC AGCAGCAAGA TTAAATGGAT TAAGTTACAG CAAGTTCATG
GGTGGCTTAA AGAAAGCAGA TATAAGAATT AACAGAAAAA TGCTGGCTCA ATTAGCAGTT
ATAGATCCTA AAACATTCAC AAACGTTGCA GTTAATTCAA AAAGTTAA
|
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| Protein sequence | MARVKRGNVA RKRRNKILRL ARGFRGGNGT LFRTANQRVM KALCNAYRDR RRRKRDFRRL
WIARINAAAR LNGLSYSKFM GGLKKADIRI NRKMLAQLAV IDPKTFTNVA VNSKS
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