| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_19171 |
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| Symbol | urtC |
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| ID | 4779719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 1576858 |
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| End bp | 1577985 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640085207 |
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| Product | putative membrane protein of urea ABC transport system |
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| Protein accession | YP_001015737 |
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| Protein GI | 124026622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.514587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTT TTTCTACAAA AAAAAGTTGG ATTCAGTTAA CTATTTGGGT GCTAATCATT
GCATTAATTA TTGCTGCTCC TTCATTACTT CCTGTTTTTA GATTAAATCT CTTAGGTAGA
TATCTATCTC TTGCAATAGT GGCTCTAGGA GTTGATTTGA TTTGGGGATT TACAGGAATG
TTGAGCTTAG GGCAAGGAAT TTTCTTTGCT CTTGGTGGAT ATTGCGCTGC AATGTTCCTC
CAATTGAATA GTTCAGGACA ATTTCCAAAT GGTATCCCTG AGTTTTTTGG TTTATATGGA
GTCGAAAAAC TTCCATTTTT CTGGGAACCT TTTAAAAGTT CAATTTTTAC TCTTATTTCC
ATTTGGTTGC TACCAGCAAT AATTGCTGGT CTTCTAGGTT ATTTAGTTTT TAGAAATAGA
ATTAAAGGTG TTTATTTTTC GATCCTTACA CAAGCGGCTC TTTTAGTTTT TTTCAATTTC
TTTAATGGTC AACAGAAATT GATTAATGGA ACAAATGGTT TAAAAACAGA CGTGACTCAA
CTTTTTGGAC AAATGGTAGG TTCTGAAATA ATGCAAAGAT GGTTCTTTTG GGTATCAGCT
ATTTTAGTGA TACTTGCATG GTTTTTTGCG AGGTGGATTG TTCGAGATAG ATTTGGAAAT
ATCCTTATTG GAATTAGAGA TGATGAAGCT CGAGTTCGTT TCACTGGATA TAATCCAGTA
ATTTTTAAAA CAATAATTTT CTCAATAGCA GGAGGATTAG CTGGTATTTC AGGAGCTTTG
TACACAGTTC AATCTGGAAT AGTTTCTCCT CAATTTATGA CTGTCCCGTT CTCTATCGAA
ATGGTTGTTT GGGTTGCTGT TGGGGGCAGA GGAACTTTGC TAGGTGCAAT TCTTGGAGCC
GTATTTATCA ATTATGCAAA AAGTTTAGTG AGTGAAGCAT TACCTGCAAG CTGGATGTTT
ATTCAAGGTG GATTATTTAT TCTTGTTGTA ACTGCTCTCC CAGAAGGGGT ACTTGGATGG
ATCCGAAAAG GAGGTCTAAA AAAATTACTC TTTTTAATCG GAATTAATAA AAAACTGGAG
ACATACCCAA GTCTTGAAGT TAATGAACAA GGTGAGGTGA AATCATGA
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| Protein sequence | MSIFSTKKSW IQLTIWVLII ALIIAAPSLL PVFRLNLLGR YLSLAIVALG VDLIWGFTGM
LSLGQGIFFA LGGYCAAMFL QLNSSGQFPN GIPEFFGLYG VEKLPFFWEP FKSSIFTLIS
IWLLPAIIAG LLGYLVFRNR IKGVYFSILT QAALLVFFNF FNGQQKLING TNGLKTDVTQ
LFGQMVGSEI MQRWFFWVSA ILVILAWFFA RWIVRDRFGN ILIGIRDDEA RVRFTGYNPV
IFKTIIFSIA GGLAGISGAL YTVQSGIVSP QFMTVPFSIE MVVWVAVGGR GTLLGAILGA
VFINYAKSLV SEALPASWMF IQGGLFILVV TALPEGVLGW IRKGGLKKLL FLIGINKKLE
TYPSLEVNEQ GEVKS
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