| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_19021 |
|---|
| Symbol | |
|---|
| ID | 4779881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1565093 |
|---|
| End bp | 1565878 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640085192 |
|---|
| Product | ABC transporter |
|---|
| Protein accession | YP_001015722 |
|---|
| Protein GI | 124026607 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.49622 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTA TCAATACAAA TTGGTGGATA ATTCCTCTTC TGATAACTTC CTTTTCAGGA
GTGCTTTGCC CTGCCATGGG GACTGTATTG ATAACTCATA AAAGGCTTCT TCAAGTCAAT
TTAATTTCAC ACTGTGTTTT GCCAGGACTT GCCTTGGCTA TGGCGCTTGG GATTGACCCA
TCTATTGGAG GTGTCTTAAG CGGATTAGTG GGAGCTATTG CAGCAGAAAG TTTGACAAAT
AAGAAAAATC AAAATTATGA AGCTGTAATG AATACAATTC TTGCTGGTTC GATGGGACTT
GGTGTTTTGC TTATACCTTT ACTTGGAATC AGGATTGATT TAGAGGCTGT TTTGTTTGGA
GATTTATTAA CTGCAAATTT GAGCGATTTA TTAAGAACTT TGATTGCGTT CTCGGCATTC
ATTTGCCTAA TGCTTTTTGG GTACGACAAG CTTGTTCATA TTGGTTTAGA CCCAGAAGGA
GCTGCTTCAA GTGGCGTTAA TGTGTCTTTT TTAAATTTAG CTCTGGGATT TACAACTGCA
CTTGTCATTG TGAGCTCAAT GTCGGCAGTC GGGGTCATCC TTGTGATTGC GTTACTCTCA
ACTCCAACTT TGTTGGGCTT ACAGAAAGCT AGCTCTCTAT GGGTTGCGAT GGTTCGATCT
TCCATATTTG GATTAGTTTT ATCGATCATT GGTTTTTCGC TTGCTATGTT TATGAATTTG
CCTCCAGGCC CACTTATTAG TGTTCTTTGT GTAATTTCAT TGATCTTGCT TCCAAGGAGT
AATTAG
|
|---|
| Protein sequence | MSFINTNWWI IPLLITSFSG VLCPAMGTVL ITHKRLLQVN LISHCVLPGL ALAMALGIDP
SIGGVLSGLV GAIAAESLTN KKNQNYEAVM NTILAGSMGL GVLLIPLLGI RIDLEAVLFG
DLLTANLSDL LRTLIAFSAF ICLMLFGYDK LVHIGLDPEG AASSGVNVSF LNLALGFTTA
LVIVSSMSAV GVILVIALLS TPTLLGLQKA SSLWVAMVRS SIFGLVLSII GFSLAMFMNL
PPGPLISVLC VISLILLPRS N
|
|---|
| |