Gene NATL1_17511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17511 
Symbol 
ID4780904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1433444 
End bp1434193 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content39% 
IMG OID640085039 
Productputative transporter, membrane component 
Protein accessionYP_001015571 
Protein GI124026456 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACT CACCTCGTTG GCTAAGAAGA TTTTTTAGCA GTATTTTAAT TGGAGGGCAA 
GCAATTGCAT CAATAGCCAA AGGGAATATA AATAAATCAG ATTTAATAGA TCAATTAATG
GAGGCAGGGC CAGGAAGCTT CCTTATCGTC TTAATAACAG GCATTGCAGC AGGAACCGTT
TTCAATATTC AAGTCGCAGC AGAATTAAGT AAACAAGGAT TAGGTTCTGC TGTTGGAGGA
CTTTTAGCAA TTGGTATGGC AAGAGAGATA GCTCCTTTAC TTACCGCAAC TCTTCTTACT
GGAAAAGTTG CAACTGCTTA TGCTGCTCAA ATAGGAACAA TGAAAGTTAC TGAGCAAATA
GATGCTATTA CGATGTTACA AACAGATCCC GTTGAATATC TAGTTGTTCC AAGGCTATGC
GCAATGGTTG TAATGGCGCC AATTCAATGC TTACTATTTT TTTCTATCGC TTTATTTAGC
GGTCAATTTA GCAGCACCAT TCTCTATCAG ATTCCACCAA GCATCTTTTG GAATTCAGTT
AGAGAATGGC TGATAACATC TGATCTTCCT TTTATGCTTG TTAAAGCATT GGTGTTTGGT
CTCTTAATCG CAATTATTGC TTGCGGATGG GGATTAACCA CAAGAGGCGG GCCAAAAGAA
GTAGGTTCAA GCACTACTGG AGCAGTAGTA ATGACTCTAA TAACCGTTTC TTTAGTAGAT
GTTTTACTCA CCCAAGTTCT TTTTGGCTAA
 
Protein sequence
MNYSPRWLRR FFSSILIGGQ AIASIAKGNI NKSDLIDQLM EAGPGSFLIV LITGIAAGTV 
FNIQVAAELS KQGLGSAVGG LLAIGMAREI APLLTATLLT GKVATAYAAQ IGTMKVTEQI
DAITMLQTDP VEYLVVPRLC AMVVMAPIQC LLFFSIALFS GQFSSTILYQ IPPSIFWNSV
REWLITSDLP FMLVKALVFG LLIAIIACGW GLTTRGGPKE VGSSTTGAVV MTLITVSLVD
VLLTQVLFG