Gene NATL1_17031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_17031 
Symbol 
ID4780858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1387183 
End bp1387920 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content40% 
IMG OID640084987 
Productintegral membrane protein, interacts with FtsH 
Protein accessionYP_001015523 
Protein GI124026408 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAA ACAGCAATTT TCAACAAGCT ATTCGTGAAG CACAATCTAG TGCACTTATT 
GGCCCAAATG TAGTAAACAA AGCCTTGCCT TATGTAGGCG GAGGAATGGC ATTAACTGGA
TTAGGTGTTT TAGGTGGACT TTCTTTACAA GCAACTAACA ATCCTTTATT CGGCCCTCTA
TTTATAGTCG CATTTATTGC AGAAATAGTT TTATTTTTTA TGGCAAGTAG CGCTGCCAAT
AATGCAAATA ACTCCAAAGC TCTTCCACTC TTGACTGGAT TTAGCTTGCT AACTGGCTTC
ACTCTCAGTG GGATTGTTGG CTTAGCAATT CAAGTTGCAG GAATGGGCGC GATAGGAACT
GCAGTATTTG CGACTGGAAT TACTTTCGTA ATTGCTTCTT CAGTTGGCAG GAAAATGAGT
GATAACGTTG GCCAAGCTTT GCAAGGTGCA GTTGGTCTTG GATTGCTTGG TTTGATTATC
GCTATGGTCT TCCAATTTGT TGGAGGTTTA TTTGCTCCAG GAATGTTTGG AGGCAGTGGC
TTTGAATTGA TGATTGCAGG TTTTGGAACC GTACTTTTTG TTGCAATGTC TTTTGTAGAT
TTCTACACAA TGCCAAGAAG ATATAACGAC GAGCAGTATT TAGCAGGAGC ATTAGGAATG
TACCTAACTT ACATAAACTT ATTTGTTTTT GTTCTTCGTT TAATCATTGC TCTTCAAGGT
GGTGGAAGAA GAGATTAA
 
Protein sequence
MPANSNFQQA IREAQSSALI GPNVVNKALP YVGGGMALTG LGVLGGLSLQ ATNNPLFGPL 
FIVAFIAEIV LFFMASSAAN NANNSKALPL LTGFSLLTGF TLSGIVGLAI QVAGMGAIGT
AVFATGITFV IASSVGRKMS DNVGQALQGA VGLGLLGLII AMVFQFVGGL FAPGMFGGSG
FELMIAGFGT VLFVAMSFVD FYTMPRRYND EQYLAGALGM YLTYINLFVF VLRLIIALQG
GGRRD