| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_15911 |
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| Symbol | dxr |
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| ID | 4780265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1301178 |
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| End bp | 1302416 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640084873 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001015413 |
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| Protein GI | 124026297 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAGCCA TAAGCGTTTT AGGCTCAACA GGATCTATTG GGACTCAAAC CCTTCAAATT
GCAGAAGAGT TTCCTGATCA ATTCAAAATT GTTGCACTAA CAGCAGGAAA GAATCTTGAT
TTAGTAACCA AACAAATTGA AACGCATCAA CCTGAAGTCG TTTCACTAGC CGATGAGTCT
CTTTTGCCAG AACTGACTAG GCGAATAAAT AGTCTCAATG AAGATTCAAA AATATTAAAG
AAGCCCTTAT TGATGGCGGG AGCCGAAGGA CTTAATACTG CGGCAGCTTG GGGAAGTGCA
GATCTTGTTG TAACTGGAAT AGTTGGCTGT GCAGGCCTCC TGCCAACACT TGCAGCTATT
GAAGCAGGGA AGGACCTAGC TCTAGCAAAT AAAGAAACTT TGATTGCAGC AGGACCAGTT
GTCATTCCTG CTTTAAAAAA AAGTGGCAGT AGACTCTTAC CTGCAGATTC TGAACACTCA
GCGATATTTC AATGTCTCCA AGGAACGCCA TGGGCTGACA ATGCAAGACT CTCAACTGGA
GTGCCTACTC CAGGATTTAA ATCAATACAA TTAACTGCAT CAGGAGGAGC ATTTAGAGAT
TGGAAAGCAG AAGATTTAGT CAAAGCCACT GTCGAGGATG CGACTAGCCA TCCTAATTGG
AGCATGGGAA AGAAAATAAC TGTAGATTCT GCAACCCTCA TGAATAAGGG ACTCGAAGTC
ATTGAAGCGC ATTATCTTTT TGGTCTTTCA TATGACCAAA TCGAAATCAT TATCCATCCA
CAAAGCATCA TTCACTCGAT GGTTGAATTG GATGATTCAT CAGTTTTAGC TCAATTGGGA
TGGCCAGACA TGAAGCTCCC TATTTTGTAT TGCTTAAGTT GGCCTAGTCG ACTTAAAACA
CCATGGCCAA GATTAAAGCT TACTCAAATA GGCAATTTAA CTTTTAAAGA ACCAGATACT
AACAAATATC CATGTATGGA ACTTGCTTAC AGCGCAGGAA AATCAGGGGG GACAATGCCA
GCAGTGCTTA ATGCCGCTAA TGAAAAAGCA GTAGAACTTT TTCTAGAAGA AAGGTTTAAA
TTTATTGATA TTCCAAAAGT AATTGAGGCG ATTTGCGAGA AACATAAATG CGACCTAAAT
CTAAATCCAA GCCTCAGTGA AATTCTTGAA ATTGACAACT GGGCAAGAGA AGAAGTCTTA
GATTATTCAG AAAAAAATAT TAAAAAAATG CAGTTTTAG
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| Protein sequence | MKAISVLGST GSIGTQTLQI AEEFPDQFKI VALTAGKNLD LVTKQIETHQ PEVVSLADES
LLPELTRRIN SLNEDSKILK KPLLMAGAEG LNTAAAWGSA DLVVTGIVGC AGLLPTLAAI
EAGKDLALAN KETLIAAGPV VIPALKKSGS RLLPADSEHS AIFQCLQGTP WADNARLSTG
VPTPGFKSIQ LTASGGAFRD WKAEDLVKAT VEDATSHPNW SMGKKITVDS ATLMNKGLEV
IEAHYLFGLS YDQIEIIIHP QSIIHSMVEL DDSSVLAQLG WPDMKLPILY CLSWPSRLKT
PWPRLKLTQI GNLTFKEPDT NKYPCMELAY SAGKSGGTMP AVLNAANEKA VELFLEERFK
FIDIPKVIEA ICEKHKCDLN LNPSLSEILE IDNWAREEVL DYSEKNIKKM QF
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