| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_14481 |
|---|
| Symbol | hupE |
|---|
| ID | 4779412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1163272 |
|---|
| End bp | 1163886 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640084728 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001015271 |
|---|
| Protein GI | 124026155 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCAAGT TTTCTCTTGC AGTTTTAACT CCATTATTTT TATTATTTAC CTTTTTATCT
AACACAGCTT TAGCTCATCA TCCTTTTGGA ATGGGAGAGA GTACTGATCT TTCAGGTTGG
CAGGCACTCC TTAGTGGTAT TGGTCATCCA TTGCTTGGAC CTGATCATTT ACTTTTTATG
TTAGGAATCG CACTGGTGGG ATTAAAGAGA TCTATTAAAT GGATCTTCCC TCTTTTAGCT
CTTGGATTAG CCGGAAGTGC ATTAGTTCAA CTACAGCCCT TGCCTGATTT ACTAGCTCCT
TGGGCCGAAG CGCTTGTCTC TCTAACTTTG ACTGTAGAGG GCTTAATTGT TCTGAATCTT
GTGAGCACTA AATGGCTTCT GCCGATGTTT TCATTACATG GCTACTTGCT TGGAAGCACT
ATCGTTGGAG CAGAACCTAC ACCTCTGATT GGTTACTTTT TAGGCCTTCT TCTTGCACAA
CTATTCTTAC TTTTACTTGT TACACAATCC ACTCAATCAA TTATTGATAA GTTTGGATTG
AATGGTCGTA ATTTATTTGC AGGAATTTGG ATAGGAATAG GACTTGCTTT CTCTTGGGTT
GCTGTAATCC CTTAA
|
|---|
| Protein sequence | MRKFSLAVLT PLFLLFTFLS NTALAHHPFG MGESTDLSGW QALLSGIGHP LLGPDHLLFM
LGIALVGLKR SIKWIFPLLA LGLAGSALVQ LQPLPDLLAP WAEALVSLTL TVEGLIVLNL
VSTKWLLPMF SLHGYLLGST IVGAEPTPLI GYFLGLLLAQ LFLLLLVTQS TQSIIDKFGL
NGRNLFAGIW IGIGLAFSWV AVIP
|
|---|
| |