Gene NATL1_11091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_11091 
Symbol 
ID4779184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1008411 
End bp1009013 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content37% 
IMG OID640084388 
Producthypothetical protein 
Protein accessionYP_001014932 
Protein GI124025816 
COG category[L] Replication, recombination and repair 
COG ID[COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00240586 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGATTAC TTGGACTTGA TAAGGATTGC TTCTCTAGCT GGTGGGCAAA ATTACCAGAG 
GGATCAACCA TGGTTGTGCA GCCTAAAATC GATGGGTGTG CAATAGGACT TAGATATAAA
TATGGACAAT TAGTAGATGC CTATACTCGT GACGATAGTG AGATTATTGA AAACATTAGG
AATATTAATT CTATTCCTTT GAGTATTGAT GACTCTCTAA AAGTTGAAGT TGAGTTGGAG
GGCGTTTTAT ATTCACCTTT TTCTAATTCA AAGATCTCGA TAGAGCAATT GCTTTCGAAC
TCATTCTCGA AAATTGACAA TAGTACCTCA ATTTTATTTA AAGCATTCCA AATTTTTTGC
TCTAAAAGTG ATGAGTTGTC AGATTTGACC CAACTTCAAA ACTGGGGATT CGAGGTCCCT
ATAACTCTAA GAACGGATGA TCCTAGGCAA GTCAAAAGAT GGCATTCTCA ATGGATCAAG
AATGAATTGT TTTCAAATCT TCCTACCAAT GGAATCGTCG CCAAATGCAA TTCCTCTTTG
ACTAAGAATT TTTTGGGCGC TAGTCCTTCA TCTCCAAATT GGGCGTTGGC TTTAACTAGA
TAA
 
Protein sequence
MRLLGLDKDC FSSWWAKLPE GSTMVVQPKI DGCAIGLRYK YGQLVDAYTR DDSEIIENIR 
NINSIPLSID DSLKVEVELE GVLYSPFSNS KISIEQLLSN SFSKIDNSTS ILFKAFQIFC
SKSDELSDLT QLQNWGFEVP ITLRTDDPRQ VKRWHSQWIK NELFSNLPTN GIVAKCNSSL
TKNFLGASPS SPNWALALTR