Gene NATL1_11001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_11001 
Symbol 
ID4781142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1002168 
End bp1002710 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content26% 
IMG OID640084379 
Producthypothetical protein 
Protein accessionYP_001014923 
Protein GI124025807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00732767 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGGTT GGCTTTACTT AATAAGAAAT AGAGATTTAT ATAAGATTGG AATAACAAAA 
AACTTTGAAA ATAGGATGAG ACAACTCAAG CCAGATAAAG TTGTTGCTAA ATTTTATAGT
ACTGATTTTG TGAAACTAGA AAGAGAGTTA CATCATCGCT ATAAAAAGTT CAGAATCCCT
CAGACGGAGT ACTTTAGATT GGAAAATTCT CATGTTAAAG AGATAAAACA AAGAATTTAC
ATACTTAATT ATCCTTTAAG TTTAACTTTT GGCATTTGTA TAAAATCAAT ATTATTATTA
TTATTATTAT TTTTTCTTAC AATAGTAGTT ATATCTTTGT ATATTAATGA CTTAAGTTTG
GCTACATATA ATTCACTTTT TTGGATTGAG CGAATTTCAT TTGGACTAGC CTTTATTTCT
TTATTTGTTT ATTCAGGTAA ATATTTAAGT TTTTGGAATG AGTTAAAATA TAGATCCACT
AGATTAATTA TTTTTCTTTT CTTTTCTTTC TTATTTCGTC TTGCAGCTAG CTTTTTCTCT
TAA
 
Protein sequence
MSGWLYLIRN RDLYKIGITK NFENRMRQLK PDKVVAKFYS TDFVKLEREL HHRYKKFRIP 
QTEYFRLENS HVKEIKQRIY ILNYPLSLTF GICIKSILLL LLLFFLTIVV ISLYINDLSL
ATYNSLFWIE RISFGLAFIS LFVYSGKYLS FWNELKYRST RLIIFLFFSF LFRLAASFFS