| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_09531 |
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| Symbol | secF |
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| ID | 4780732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 878234 |
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| End bp | 879190 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640084230 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001014776 |
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| Protein GI | 124025660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.14982 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCTA AATTTAATGT TCAAATTTAT AAAAATAGAA AATATGTGTG GCTTGTTTCA
TTCTCTTTAT GTTTAATTTC AATAATTGGA ATGCTAATTT GCCTTAAAAG TTCTTCTATT
AAGGCCCCTT TAAATCTTGG CTTAGACTAT ACCGGAGGAA CTCAAATTAC CTTAGAGAGG
AGTTGTACTG ATGAATGTAT TAGCTTAAAT ACAAGTGAAA TATCTAATAA TATAATCGCT
TTAAAAAAAC AGGATAAAAG TTTTAGTTCA AATACATCTC CCAACTTATC TAGATCACAG
ATTCAATTAC TTGATAATTC ACAATTAATA TCCATTAGGC TTCCATTTTT ATCTGCAGAT
CAATCTGACT CTGTAGTGGC CGAGGTTAAT AAATCTTTTG GGCCATTTAA CAATGAAAAT
ACGTCTGTAG AAATTATTGG TCCAAGTCTT GGTAGGCAGT TACTTAAAAG CAGTTTAATT
TCTTTATTCT TTGCTTTTCT TGGAATAGCT TTATATATTA ATTTTAGATA TGACAGAAGA
TACTCATTTT TAGCATTATT TGCCCTTTTG CATGACATAC TTATTGTTTG CGGTGTATTT
GCATGGCTGG GATATTTCTT TAATGTAGAG GTTGATTCCT TATTTGCTGT ATCTCTATTA
ACCATTGCAG GCTATTCAGT AAATAATACT GTTGTCGTTT TTGATAGGAT AAGAGAAAAA
AGTTTATTAG AAAATCAATT AAGTTATAAA TATCAGATTG ATAAAGCCGT TGGTGCAACA
TTAACGAGGA CGATATATAC AAGTCTTACA ACACTACTTC CATTAATATG TATATTGATT
TGGGGAGGAT CAACATTGTA TTGGTTTGCC TTTGCGCTGT TAATCGGCGT TATAATTGGA
TCATGGTCGA GTATAGCTTT AGCACCTTCA TTGTTATCAA TAACAAGTAC AAAATAG
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| Protein sequence | MKAKFNVQIY KNRKYVWLVS FSLCLISIIG MLICLKSSSI KAPLNLGLDY TGGTQITLER
SCTDECISLN TSEISNNIIA LKKQDKSFSS NTSPNLSRSQ IQLLDNSQLI SIRLPFLSAD
QSDSVVAEVN KSFGPFNNEN TSVEIIGPSL GRQLLKSSLI SLFFAFLGIA LYINFRYDRR
YSFLALFALL HDILIVCGVF AWLGYFFNVE VDSLFAVSLL TIAGYSVNNT VVVFDRIREK
SLLENQLSYK YQIDKAVGAT LTRTIYTSLT TLLPLICILI WGGSTLYWFA FALLIGVIIG
SWSSIALAPS LLSITSTK
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