Gene NATL1_08371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_08371 
Symbol 
ID4779991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp769589 
End bp770512 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content35% 
IMG OID640084112 
Productputative mRNA binding protein 
Protein accessionYP_001014660 
Protein GI124025544 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.499278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0509544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTGA AAGTTCTTTT TTACGGTGGA ACAAGGTTTG TAGGGAAAGC CCTTGTCTCG 
AACTTGTTAT CAAAAGGACA TGAGATATTT GTTTTTACAC GTGGAAATTT ACCAGTACCA
GAAAATATAA CTCACCTAAA GGGAGACAGG TCAAATGATG AGGATCTAAA AAAACTATCT
GATCATTCAT TTGATCTGAT TGTTGATAGC TCTGGACGAA AGTTGGCGGA TACGCAAAGA
CTTCTTAAAT TTTCAGGTCT TCCTAGTTAC AGATTTATCT ACATAAGTTC TGCAGGCGTA
TATGACAACA CACAATTATT TCCTGTTGGT GAAGATGGTC CAATAGATCT TGAAAGTCGT
CATATAGGTA AAGCAAAAAC AGAGTCTTGG CTCAAGGCTG AAGGTATTCC TTTTACGAGT
TTTCGCCCGA CATATATTTA TGGCCCAGGC AACTACAACC CTATTGAAAA ATGGTTTTTT
GATCGTATAA CTAATGGTCG ATCTATTCCT GTTCCACTTG ATGGTCAAGC GATCACGCAA
TTAGGACATG TTTCTGATTT GGCCGAGGCT ATTGCGAAAT CTCTTGAAAC AGATAAAGCG
AATAATCAAA TTTATAACTG TTCAGGAAGA AAAGCAGTAA CTTTTAAAGG TTTAATTGAC
ACGGCAATTT TAGCTACTGG AAACAAAGTC ACTGATTTTG ATTTGCGTTC TTTCGATCCA
TCAAAACTTG ATCCTAAAGC AAGAAAACTT TTCCCTCTAC GGTTAATTAA TTTCTTTACT
GATACTTCTA AAATTGAAAA AGATTTATCT TGGGAGCCCA AATTCGATTT GTTAAATGGT
TTAATTGATA GCTATAAGAA TGATTATTTA TTAGCTAATC ACGAACAAGT TGATTTTAGT
TCTGATGAGC TTCTTTTTGA TTGA
 
Protein sequence
MILKVLFYGG TRFVGKALVS NLLSKGHEIF VFTRGNLPVP ENITHLKGDR SNDEDLKKLS 
DHSFDLIVDS SGRKLADTQR LLKFSGLPSY RFIYISSAGV YDNTQLFPVG EDGPIDLESR
HIGKAKTESW LKAEGIPFTS FRPTYIYGPG NYNPIEKWFF DRITNGRSIP VPLDGQAITQ
LGHVSDLAEA IAKSLETDKA NNQIYNCSGR KAVTFKGLID TAILATGNKV TDFDLRSFDP
SKLDPKARKL FPLRLINFFT DTSKIEKDLS WEPKFDLLNG LIDSYKNDYL LANHEQVDFS
SDELLFD