| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_08041 |
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| Symbol | rpe |
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| ID | 4781152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 740353 |
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| End bp | 741105 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640084079 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001014627 |
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| Protein GI | 124025511 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0416891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCAAT CCATTTCTTC AGCAATTTTT ACTGAGCACC GTCCAGTTCA GATAATCCCT
TCAGTATTGC CAGCAGACTG GGCAAACATG GGTCAGTGCG TAAAAGATCT TGAACTGGCG
GGTGTAGACA GAATTCAATT TGATGTGATG GATGGGAACT TTGTCCCGAA TCTAACTTTT
GGTCCAGAAA TGATTTCCGC ATGCCGAAAG TATTGCAGCG TTCCATTTGA GACTCAGTTA
ATGGTTAGTC AATACAACTG TGAAACCATG CTTGAGGGAT ATGTCGAAGC AAGTAAGGGG
GCTAACGGAG AGCCAGGTGT TGTAATTGCT CATGCTGAAG CAAATGTTCA CCTTCATCGA
ATTCTTGGCA AGATTCGTCA ACTTGGAGGA TCTCCCTCAG TGGCCCTTAA TCCTCATACT
CCAATGGATA TGGTTAAGGA TGTGCTTGAT ATGGTTGATC ACGTATTGGT AATGACTGTT
AACCCCGGAT TTGGTGGCCA AGCCTACATC CCAACAATGC TCAACAAAAT TACGCAATTA
AGAAAAACTA TTTTAGACAA TGGATATAAC GTAGATATAG AAGTGGACGG AGGAATAAAG
GCTGATTGGT CACTATCGCA ATGCTGCGCT GCAGGAGCAA ACTGCTTCAT TGCAGGAAGT
GGTATGTTTG CTTATCCAAC ACTTAAAGAA GGTTGTGATG CACTAAGAAA AGTTGCCAAC
GACGCACAGA ATGGAATAAT TGTTGAAAAA TAA
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| Protein sequence | MIQSISSAIF TEHRPVQIIP SVLPADWANM GQCVKDLELA GVDRIQFDVM DGNFVPNLTF
GPEMISACRK YCSVPFETQL MVSQYNCETM LEGYVEASKG ANGEPGVVIA HAEANVHLHR
ILGKIRQLGG SPSVALNPHT PMDMVKDVLD MVDHVLVMTV NPGFGGQAYI PTMLNKITQL
RKTILDNGYN VDIEVDGGIK ADWSLSQCCA AGANCFIAGS GMFAYPTLKE GCDALRKVAN
DAQNGIIVEK
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