| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06451 |
|---|
| Symbol | |
|---|
| ID | 4779265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | + |
|---|
| Start bp | 586042 |
|---|
| End bp | 590001 |
|---|
| Gene Length | 3960 bp |
|---|
| Protein Length | 1319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640083923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001014472 |
|---|
| Protein GI | 124025356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGATG AGTGGAGCTC TAAAAGATTA AAGCGTTGGG GACTTGCTGG AACCTTTGCT
GCGTTGGGTG GTGTTTTGAT TTGGAGTGGC GCAGATCTAC TAGTAGATAG AACTATAAGC
CGTTTTTCTC CACAAATAGA AAAAACATTA TCTAATTCAT TAGGTCATCC TTTAAAAATA
GGTTCATACA GGGGGCTCAG ACCATGGGGA GTTGAGTTGG GGCCAACAAG GCTCCTTCCA
GGTATTAAAG ATTCTTCTTC AGTTAATATT TCAAATTTAA CAATTAAATT TGCTCCTTTT
GCGAGTTTAT TGAATTGGAA ACCAGTAGCA ATATTTAATC CAAAAGGAAC AGAAATTATA
TTAAACAAAA ATGATACTGG TTCGTTTTGG GTTGTTCCCC AGAAAGATAA TCCTAAACAA
ATCAATCTTC AACTAAAATT TAATTTAAAA GAACCAACCA AAATTGTATT TAATGCTGGG
GATACGACAT TATTAGCAAA AGGTAATCTA TCTCTAAATC TTGGTGAGAA AAAAATTTTT
GGTGCGATTA ATCTAGAGTC CAAAGAACAA GGAAGCCTCT ATCTTTCAGG AAAGGGTTAT
TGGGATGGAA TCGAATTTCA AACTAAAGTA AAAATCAATA AACTTAGTCT TTCTATCTTT
GAGAGAATTT TAGGAAATAA TTCTAATTTT ATTGCAGAGG GAAATATAAA TGGAAGTCTA
AAGTTGGGAG TTAAGAAAGG CTTGATAAGG TGTAATGGTG GTTTATTGCT TAATAACTTA
ACTCTGAAGG GAGGGCCTCT AAGTGATACA TTGTCTACAA ATAATTCAAA AATAGAATGT
GATAAAAATA AGCTTAAGTT AATTGATTCT AATTGGAATT ATGGATATTG GGATATATCT
AATTCATCTG AAATACCATT CTATAAAAAA GATAAAACTT ATATAAATTC TGAAACTACT
ATTAAAATTA AAGATTTTGA TCATAAACCA CTTTCTTTAA AATTAAAATT ACCAATCTCA
GTAGTTGACA GACAATTTAT TCCTGGGGAA CTTAATGCTA ATTTTAATTT AGAATCTTTT
CCTTTAGGTG CTTTAAATCC AATACTAAAT GCATCATTAT CAGGGAAATT AAATACAAAA
GGTGATTTTC AGGGTCCTTT ATCTTCTCTG AACTCTACTA TTAACCTTTC CTTGGAAAAT
CCACAAGTTA ATGGTATTCG ATTAAGGGAA AAATGGAGAG GTTCTTTTAC TCGAATTCCA
AGTGAAAAGA AGTGGGGGAG TTTGAGAATG AAATCAGAAG GTGCTTCTAT CCCAGGCAAT
CTTCAAATTA ACTTTAATAA GGATGGTAAT TTTAATGATT TAAATCTAAA TAGATTAGGA
GGTGAAATAA GTCTAAATCC TAAATCAAAT GCTTTTGAAT GGGAGGCTAA TAAATTCAAA
TTAGATCGTG TAGAAGTGGC ATTCCCGCCA GAGAAAAGTT TTAAACGAAT CTTTGGGGAA
GTTACAGGTA ACGGATTATT TTCTCTTGAC CCATTATTTC TTAATGGTGA TTTGAGTTTA
GATTATTTTA GATTGTTAGG TTTCAAATTA AAAAATGCAA GTATTAAAGG TCAAATTAAA
AATTCAGAAA CTAATTTAAC AGGTGAATTA ATACCATCTG AAAATGGAAA GATTAAATTT
GATATTAATA ATGGCTCCGA ATTTTCTTTG TCAGCTCAAG TGAAGGATGT AAGCGCTAGT
TGGATTACTG CTACAGCTTT AGAGTTTCCT AAATTAGGAT TGAAATATTC AGATGCAATT
GGGAAGGCTG AAGATTTAGA AAAATTTATA ATTGGTTATC CAATTAGTTC TATAGATTCT
CAGTTCGAAG CTTTAACTAG GTCTCAAGAT TCATATAGAG AAGAGATTTC TAAGGTAAAT
AGTAAGAGCA TTATTAATCC TTATGATCTA AAGGGGGATA TTAATGCTGA TATTAAATTA
AGTGGTCCAA ACCTATCAGA TTTGAATTTA GAAGCAAAAG CTTTTGGTAA GGTTTGGACA
AATAAATTAA AGATTATAAA TTCTAATAAA ATCAGACCCT TTAAGGTAAC TTTGAATGGG
AACCTAGCTT CAGGTCTGGG AGATTTTTCT TTACTTAATT TAAATTTTTC ATTATTATCT
CTAGTTGCAC CAATACCTTC AGCGGTTGAT GGGTATTTTG GTTTAAAAGG TAAATATAGC
TTAGCTAATT CAACTCCAAA AGTTACAGCA GATTTAATTA TTAAAGATAC AGTAATTTAT
AACAGAAAGA TTATTTTAGA TAATGGAAAT ATTATATTTA AAGACAATAA TCTCGAATTT
GATATCACTC TAAGGGATAA ATCTTCGGCA AATCCTGTTA AGTTAGGTGG AACCTACCCA
TTAATTAGTT CTTATCCTAT TGATTTAAAG ATCGAAAGTC ATGGAGATGG GTTAGCGTTC
TTGACTGGGC TAACGAAAGG GAATGTCTCT TGGACCTCAG GGACAGCTGA TCTAAGCTTG
TTGATTAGAG GAACCCCTGC GAAACCGGTT GCTAATGGTT TTTTGGTTTT AAAAAACAGT
GAGCTACTTT TTCAAGATAA AGAAATTAAT AATTTGAATA GCACAATAGT TTTTGATTTT
AATCGACTTG AAATTCGTGA TCTAAAAGCA AATATGGGGG CTAACGGCAT TATTAGCAGT
CAAGGTGGAA TTTCGTTGTT TGATTCTCAA TTAAGTGAAA GCGAGCCTTT GGCTCTTTCG
ATAGAAAAAA CACGTATTAA GACGGCATTT ACTGACATCA GAGCTTCGTC TAGCCTTGTT
GTTAAGGGAT CTATTTTGAA ACCTCAATTA TCAGGTGAAG TCTTTATCTC AGAAGGTTCG
ATTTTTGCTA AAAGGGCTAA CAATCCAAGT AAGACTTCAT CTGAAAAATC GGATCGTTAT
AAGGATTCTA AGGTCAGAAT AATTCGTAGA TTACCAGAAC AAAACTGGAA CCAGAAAGAA
CCTCTGGTTT TATTTATTAA AGATGAAGAT GCACCTGCAA GTCGAATAGT TAGTGCTGGT
TTGCCTAATG GATTTGAATC ACTAACCTTT GATAATTTAA AGCTCGCACT TGGCCCTTCA
TTGCGATTAG TTTCTCAACC CTTGGCAAGC TTTGAAACAA ATGGATTCCT TATCTTGAAT
GGCGCTTTTG ACGAGACTCT TGATGTTAGT GGAGTTATTA AACTTGATAG TGGCTACGTT
AATCTCTTTA CGACTACTTT TAATCTAGAT CAAAGTGAAC CAAATGTAGC CGTATTTGTA
CCATCTATGG GCTTGGTTCC ATATGTTGAT GTGACTCTGA ATAGCCGCGT TCCAGATAAT
GTTAGAGACG TAAGTAATTT TTCCTCTAAT GGCATGGCAT CATTTGGTAT TGGAGGATCT
CGTTTCGTAA ATGTTGAAGT GGCGGCTTCT GGACCTGCAG ATCGCATTAG TGAAAATTTT
CAATTGAGAA GTACTCCATC TTTGGGAAGA AGTGAGTTGA TAGGACTTTT AGGAGGTAAT
TCTCTTGCAA ATCTAATAAG TAGTGGAGGC AATGGTGATG TACTTGCGAG CTTTTTGAAT
AGATCTTTTG CTTCGTATCT TCAAGGCAAT ATCAATGGTT TTTTGAGTGA TAGGCTTCAA
ATATCATTGT ATCCGGCATA TATAAATGGA TCAGATTCAG AGGATGATAC TAGTGATAGT
AGTTCTTCAA GTGCTGATCA GGAAGATACT AATCTACCTG GTCAACAGGC ATGGGTGACC
GAAATAGGAG TTGATCTTAA CGATAAAATT AATTTCTCAG TTCAGGCTGC TCCTAACCGA
AAAGATATTC CACCGAAAGG AAATATTACT TTTCAAATGA ATCCTAACGT AGGTCTACTA
GGCTCTTTTG ATAAGAATGG GAATTGGCAA AGTCAACTCC AACTCTATTT TAGATATTAA
|
|---|
| Protein sequence | MGDEWSSKRL KRWGLAGTFA ALGGVLIWSG ADLLVDRTIS RFSPQIEKTL SNSLGHPLKI
GSYRGLRPWG VELGPTRLLP GIKDSSSVNI SNLTIKFAPF ASLLNWKPVA IFNPKGTEII
LNKNDTGSFW VVPQKDNPKQ INLQLKFNLK EPTKIVFNAG DTTLLAKGNL SLNLGEKKIF
GAINLESKEQ GSLYLSGKGY WDGIEFQTKV KINKLSLSIF ERILGNNSNF IAEGNINGSL
KLGVKKGLIR CNGGLLLNNL TLKGGPLSDT LSTNNSKIEC DKNKLKLIDS NWNYGYWDIS
NSSEIPFYKK DKTYINSETT IKIKDFDHKP LSLKLKLPIS VVDRQFIPGE LNANFNLESF
PLGALNPILN ASLSGKLNTK GDFQGPLSSL NSTINLSLEN PQVNGIRLRE KWRGSFTRIP
SEKKWGSLRM KSEGASIPGN LQINFNKDGN FNDLNLNRLG GEISLNPKSN AFEWEANKFK
LDRVEVAFPP EKSFKRIFGE VTGNGLFSLD PLFLNGDLSL DYFRLLGFKL KNASIKGQIK
NSETNLTGEL IPSENGKIKF DINNGSEFSL SAQVKDVSAS WITATALEFP KLGLKYSDAI
GKAEDLEKFI IGYPISSIDS QFEALTRSQD SYREEISKVN SKSIINPYDL KGDINADIKL
SGPNLSDLNL EAKAFGKVWT NKLKIINSNK IRPFKVTLNG NLASGLGDFS LLNLNFSLLS
LVAPIPSAVD GYFGLKGKYS LANSTPKVTA DLIIKDTVIY NRKIILDNGN IIFKDNNLEF
DITLRDKSSA NPVKLGGTYP LISSYPIDLK IESHGDGLAF LTGLTKGNVS WTSGTADLSL
LIRGTPAKPV ANGFLVLKNS ELLFQDKEIN NLNSTIVFDF NRLEIRDLKA NMGANGIISS
QGGISLFDSQ LSESEPLALS IEKTRIKTAF TDIRASSSLV VKGSILKPQL SGEVFISEGS
IFAKRANNPS KTSSEKSDRY KDSKVRIIRR LPEQNWNQKE PLVLFIKDED APASRIVSAG
LPNGFESLTF DNLKLALGPS LRLVSQPLAS FETNGFLILN GAFDETLDVS GVIKLDSGYV
NLFTTTFNLD QSEPNVAVFV PSMGLVPYVD VTLNSRVPDN VRDVSNFSSN GMASFGIGGS
RFVNVEVAAS GPADRISENF QLRSTPSLGR SELIGLLGGN SLANLISSGG NGDVLASFLN
RSFASYLQGN INGFLSDRLQ ISLYPAYING SDSEDDTSDS SSSSADQEDT NLPGQQAWVT
EIGVDLNDKI NFSVQAAPNR KDIPPKGNIT FQMNPNVGLL GSFDKNGNWQ SQLQLYFRY
|
|---|
| |