| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_06381 |
|---|
| Symbol | |
|---|
| ID | 4779339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 578598 |
|---|
| End bp | 579584 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640083916 |
|---|
| Product | nucleoside-diphosphate-sugar epimerases |
|---|
| Protein accession | YP_001014465 |
|---|
| Protein GI | 124025349 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0655453 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.975907 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAACG AAATAATTCT GATTACTGGA GCAAGTGGAT GTGTTGGGCA ATACATAGCA
AATTGGCTAA TCGAAAACTC AACTTCAGAA TTATTTTTAT GGGTTAGAGA TCCTAAAAAA
ATAACTTCAA TAAATTTAGA AAACCCAAGG ATAAAAATTT TAGTCGGAGA TTTGAGAGAA
TCAAATAAGT TCAAGAAAGA AATTTCAGAA GTCAACAGAG TTATTCATAC TGCGACTGCT
TGGGGTGATC CTAAAAGGGC GAAAGAAGTC AATATTGATG CAGTAAAAAA TTTGCTCAAT
TTACTAAATC CCTCCAATAT CAAACAAATT ATTTATTTCT CAACTGCAAG TGTTCTTGAC
AGAAACTTAA ATTTGTTACC GGAAGCTTTT ACCTATGGAA CAGAGTACAT ACAAACAAAA
GCACAATGCC TCAGAGAGCT TGAGTCTCAT CAGCTTGCAA CGAAGATCAT AGCTGTTTTC
CCAACACTAG TTTTTGGCGG ACGTTTAGAC GGTAAAAGTA AATTTCCAAC CAGCTATCTT
ACCGAAGGAC TTAGAGATGC ATTGAGATGG ATCTGGCTGG CTAGATGGAT AAAATTATCC
TCAAGGTTTC ATTTTATTCA CGCAGCAGAT ATCGCTTTCA TTTGCGGGCA TCTGGCTACT
TCTGATTTCG AGCCCATACA ACCTTTTTCT GCCACTAAAA TAAAAAAATT AGTTTTAGGT
CAACCCTATA CAAGTATTGA TGTAGTAATT CAGACGCTTT TAATATGGAA AGGAATGAGA
AGAGTCCCTC AAATCCCAGT CTTGAACTGG CTTATTGAAC TTTTAACTGT ATTACTACCA
ATTCAAATGA CAAACTGGGA TAGATTTAGT CTTAGACAAA AACACTTTAT ACATGAGCCC
GTAACCTCTC CTGAAACCTT CGGGGGTATA AGTCATGCCA AAACGCTAAG TCAAGTTTTA
CATAATTCTG GTTTAACTAA ACACTAA
|
|---|
| Protein sequence | MKNEIILITG ASGCVGQYIA NWLIENSTSE LFLWVRDPKK ITSINLENPR IKILVGDLRE
SNKFKKEISE VNRVIHTATA WGDPKRAKEV NIDAVKNLLN LLNPSNIKQI IYFSTASVLD
RNLNLLPEAF TYGTEYIQTK AQCLRELESH QLATKIIAVF PTLVFGGRLD GKSKFPTSYL
TEGLRDALRW IWLARWIKLS SRFHFIHAAD IAFICGHLAT SDFEPIQPFS ATKIKKLVLG
QPYTSIDVVI QTLLIWKGMR RVPQIPVLNW LIELLTVLLP IQMTNWDRFS LRQKHFIHEP
VTSPETFGGI SHAKTLSQVL HNSGLTKH
|
|---|
| |