Gene NATL1_05731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05731 
Symbol 
ID4780102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp518307 
End bp519653 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content34% 
IMG OID640083850 
Productmembrane-associated protease 
Protein accessionYP_001014400 
Protein GI124025284 
COG category[R] General function prediction only 
COG ID[COG1266] Predicted metal-dependent membrane protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.261974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAAG CAAAAACTGG TTGGAAATGG GCGATCGCTC TATTTTCATT GCTTTTAACT 
GTTCTGATAT GGCAACAAGG TTTGCAAGAA AGCTTTGAAC GTCCCTCAGT AGCTCCAAAG
ATTTCTTTGA TGCAAACTGA GATGGCAGTT TCAGCTTCTT CATCGTTACC TGAAACAATA
CAAGAAGTAT TTTTAGGTTC AGAACCTCAA GAAAAACTTT ATCAAGCTCT CAGTGACATT
CCTTTGGGAC AAATTGAGGA TAGAGAAAGA TTGTTATTAG CAATTCTCGA AGAGTCTGAG
AATGAGCAAA AATTTATCTT GAAGGAAGGT TTTAGTGATA AGAATTTTGA AACAGTTAAA
GGCTATATAT TAAATAGAGA AAAAGGTAAA GAAATAGATA GATTTCCTGA TTTTGATGAG
ATTGAATTAG ACCCTTTACT TTATCAAATT TCATGCTCTT CTTTGGGATT TGCTGATGAA
AAATGTATTA ATAAAAAATA TAATTTTTAC ACTGCTTTAA GGCTTTTAAC TTCACAACTA
TTTCCATTTT TTGCTTCTAT TGCAGGGAGT GTATTATTAA TTAGGTATGC ATTTATTTTC
TTAAGAAAGA AAAATACTCC ATGGCCAGAA ATGATATCTC CCCCCCTATC AGTAATAGAT
ATGGTTCTTC TGATCTCTGG TGGTTTCGTT GTTATTGGTG AAGTCGTTTT CCCGGCACTA
ATTATACCAA TAACAGATTT ATTGTTTAAT AATTTATCCT CTCCATTAAA CCAGTCTCTA
AGAGTATTTA TTGGTTACTG TTCAATGACC ATAGCTCCTT TATTTATAAT TAGATATCAA
TTAATGGGTT TAGTTCCTTC GGGGATTGAT GGGGGTTGGC TTCAATGGAA AATCAGACCA
ATCAAAGAAG GACTTTTTAA ATCAATAAGT GGATGGTTAA TGATTATGCC TTTAGTGCTG
CTTATTGGGT GGCTAATGAA TGAGATTATT GGTGACCAAG GAGGAAGTAA TCCTTTATTG
GAATTGGTTT TAGGTAGTGA TGAATTCTTT CCATTATTTT TGCTTTTAAT TACAACTGTT
GTTTTGGCTC CAGTTTTTGA GGAGTTAGTT TTTAGGGGTA TTCTTTTGCC TGTATTGGTA
TCCAAAGTTG GCAAAGCTAG CGGAGTTTTA TTAAGTGCCT TGATCTTTGC TTTGGCTCAT
TTAAGTGTAG GGGAATTACC TCCTCTATTT GTATTAGGAA TTGGTCTTGG TTTGATGAGA
TTGAGCTCAG GAAGGTTATT TCCTTGTGCT CTTATGCATT CCCTATGGAA TGGAGTCACT
TTTATTAGTC TACTATTAGT AGCTTGA
 
Protein sequence
MRQAKTGWKW AIALFSLLLT VLIWQQGLQE SFERPSVAPK ISLMQTEMAV SASSSLPETI 
QEVFLGSEPQ EKLYQALSDI PLGQIEDRER LLLAILEESE NEQKFILKEG FSDKNFETVK
GYILNREKGK EIDRFPDFDE IELDPLLYQI SCSSLGFADE KCINKKYNFY TALRLLTSQL
FPFFASIAGS VLLIRYAFIF LRKKNTPWPE MISPPLSVID MVLLISGGFV VIGEVVFPAL
IIPITDLLFN NLSSPLNQSL RVFIGYCSMT IAPLFIIRYQ LMGLVPSGID GGWLQWKIRP
IKEGLFKSIS GWLMIMPLVL LIGWLMNEII GDQGGSNPLL ELVLGSDEFF PLFLLLITTV
VLAPVFEELV FRGILLPVLV SKVGKASGVL LSALIFALAH LSVGELPPLF VLGIGLGLMR
LSSGRLFPCA LMHSLWNGVT FISLLLVA