Gene NATL1_05341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05341 
Symbol 
ID4780483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp483720 
End bp484484 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content29% 
IMG OID640083811 
Productshort chain dehydrogenase 
Protein accessionYP_001014361 
Protein GI124025245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.118311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA GCTTGTCAGA CAAATCAAGG TTTAAAGGTT TAAAAATTGC CATAACCGGT 
GCGAATGGAA GCCTAGGCAA GTCTCTTATT GAGGTTCTAA AAAAAGAAGG GGCTTATCTA
ATTGGCTTAA CTCATGACAA AAAGAATAAT AGTAACTCTG AGGGAAGCAA ACCTGACGAA
TGGATTCTAT GGTCCTGTGG AAAAGAAAGA CTCCTTTCAA GTAGTCTTGC CAATGTTGAC
ATTTTAATAC TTAATCATGG ATTTAATCCA AAAGGCATGA TTGAATCAAA TGAAATAAAT
AAAGCCTTAG AAATAAATTC CCTTAGTCAT TTGAGATTAA TAGAAATCTT TGAGGATTTA
GCCCTATCAA ATAATTTAAA TAAGTACAAT TCTAAGGAAG TATGGGTAAA TACATCTGAA
GCAGAGATTC AAATAGCTTT TAGTCCAGTA TATGAAATAA CAAAACGTCT AATAGGTGAA
CTTATAAGTT TAAAAAAAAG TAAATTATTA ATGGAAAAAA GAAATTCTTT TATCATCAAA
AAATTAATAT TAGGTCCTTT TAAATCGAAA TTAAATCCAC AAGGAATCAT GAGCCCTGAA
TTTGTGGCAA AAAAAATAGT TCAAAAAGCA AAAAAAGAGG ATTATTTAGT AATAGTATCT
CCTAATCCCA TAACACATTT GATAATGCCA TTCGTTGAAT TAATTAGAAT ATTCTATTCA
AGATTTATAA ATAAAATCTA CTCAAATACC ACCCCTTTAA AATAA
 
Protein sequence
MKKSLSDKSR FKGLKIAITG ANGSLGKSLI EVLKKEGAYL IGLTHDKKNN SNSEGSKPDE 
WILWSCGKER LLSSSLANVD ILILNHGFNP KGMIESNEIN KALEINSLSH LRLIEIFEDL
ALSNNLNKYN SKEVWVNTSE AEIQIAFSPV YEITKRLIGE LISLKKSKLL MEKRNSFIIK
KLILGPFKSK LNPQGIMSPE FVAKKIVQKA KKEDYLVIVS PNPITHLIMP FVELIRIFYS
RFINKIYSNT TPLK