Gene NATL1_05131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_05131 
Symbol 
ID4780875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp468160 
End bp468657 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content32% 
IMG OID640083788 
Producthypothetical protein 
Protein accessionYP_001014340 
Protein GI124025224 
COG category[S] Function unknown 
COG ID[COG1426] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.607741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.357471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAAAA GTGAAGAAAG AAAAAGCGGT AGTTCTCATG TCGCAAATAA AAAATCCTCA 
TTACGAACTG TTGGTGAGTT TCTCAGAGAA GCCCGACAAG GTAGAAATCT TTCAGTAGAG
GATCTATCTT CCTCACTAAG AATTGGGAAA GAACAATTGA TTGCACTTGA ATCAGGGGAC
GAAAGCGCAC TTCCTGAAAA AGTTTTTATT AGAGCAATGG TTCGAAGAAT TGCCGAGAAA
TTAAACTTAG ATACAAGTTT TATTCTTGAA GAACTTAATG AAAAGAAAAA AAATGAACCT
AAACCTAGCC CTGTGATTAA GAAGAAAAAT ACTAGAAAAA ACAAAAAGTT CAATCCATTT
ATCATTGTAA TTTTATCGGG TGCTTTAGGA TTATTTACTT CAATTATGCT ATTAAAATAT
ATTGAAAAAG GACAAAATGA TTCCCTTAAT CCTCAGCGAA GTGATATCTT TTTATTAGAC
AAAAAGATAT CTTCTTAA
 
Protein sequence
MEKSEERKSG SSHVANKKSS LRTVGEFLRE ARQGRNLSVE DLSSSLRIGK EQLIALESGD 
ESALPEKVFI RAMVRRIAEK LNLDTSFILE ELNEKKKNEP KPSPVIKKKN TRKNKKFNPF
IIVILSGALG LFTSIMLLKY IEKGQNDSLN PQRSDIFLLD KKISS