Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_04871 |
Symbol | birA |
ID | 4781089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 442736 |
End bp | 443413 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640083764 |
Product | putative biotin--acetyl-CoA-carboxylase ligase |
Protein accession | YP_001014316 |
Protein GI | 124025200 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.220847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAA CTATATGTGC TAGTACAGAA ATAGAACTAT CAAAATGGAT TACAGAAAAA CCAGTAAAAA AAAATCAGCC AATAGCTATT TTTTCTTCTT GCCAAAGATT TGGTAAAGGT CAAGCTGGTC GAATTTGGCA TGCACCAAAA GGAGGGGTTT GGGTTAGTGC GGCTATTAAC AGGGAAGATT CGTGTGAAAA TAATTCTCAG CTTTATGGGT TAGCGGTGGC TTTAGCTTTG GTTGAAAGAA TTGAACGGAT AGGAGTTAAT GTCAATATAA AATGGCCTAA TGATCTATTG GTTGATGGAC AAAAATTAGC TGGAATCTTA CCTAGATTAT TTTTTAGAGG AGGAAAACTT AGATTATTAA GAGTTGGAGT AGGTTTAAAC GTTTTTAATA ATGTTCCTCA AGAAGGGATT TCACTAAAAC AAATTATTGG AGATAAAACG ATAAATATAA ATTTTTGGTC TTCAGAAGTT CTACTTGCAA TAGAAAGATC TTTAGATCTT TTAGATAATA AACATTTTTT GTGCAGTCAG GTTGAACAAA GACTGTGGTC AAGAAAATAC ATTGATAAAG AAACTGGATT GAAATGGGAT ATTAAAGGTA TAGATTCAAG TGGAGGATTG AATCTTTCTA AAGAAAATAA AGTGAAAGTC TTGTCTAATT ATGCATGA
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Protein sequence | MLKTICASTE IELSKWITEK PVKKNQPIAI FSSCQRFGKG QAGRIWHAPK GGVWVSAAIN REDSCENNSQ LYGLAVALAL VERIERIGVN VNIKWPNDLL VDGQKLAGIL PRLFFRGGKL RLLRVGVGLN VFNNVPQEGI SLKQIIGDKT ININFWSSEV LLAIERSLDL LDNKHFLCSQ VEQRLWSRKY IDKETGLKWD IKGIDSSGGL NLSKENKVKV LSNYA
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