| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_04511 |
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| Symbol | deoC |
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| ID | 4780128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 412509 |
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| End bp | 413192 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640083728 |
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| Product | putative deoxyribose-phosphate aldolase |
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| Protein accession | YP_001014280 |
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| Protein GI | 124025164 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAA ATAGCTTGGA AGAAGCTCAT GCCAATATTT CTAATGTGAT TTATCAAGCA
ATCCTAAATC CTCATTTTAA TAAAGAAACG ATTGTTCAGA TTTGTGATGC CTCCAAGCAA
AATAGCTTCG CAGGCTTATG CACTAGTCTT GCAAACCTAA CAATTGCACG TGAAAGGTTA
GGTAGCAAAA GTACTACAAA ATTAATCTCA GTCATTGCCT TCCCTTTTGG TTTCATCCCA
ACTTCTAACA AACGAAAAGA AGCCGAGTAT GCAATAGAAA AAGGAGCAGA TGAGTTAGAT
CTAGTTCCAA ATTATTTTGC ATTAAAGGAA GGAAAAATAG AACTTTTTGC TGAGGAAATA
AATCAAATAA GTGAACTTGG TATTCCAGTA AGAGTAATAA TTGATGCAAA TATACTCATA
AACTCATCAA AACTTTCGAT GGCAATAGAT GCTCTAATCG ATGCGGGAGC AATTGGGATT
CAAATAGGTA ATGGTTTTGG TCCATCTGTC TCAAAGGATC AAACAAAACA TGTCTCTAAA
CTTGTTAAAA ATCGTTGTTC AATTAAAGCT GTTGGAGGCA TTAAAACTTT TGATCAAGCA
ATAGAAATCA TTGAAGCAGG GTCAACATAT ATTGGAACAA GTTTTGGCTT TGAAATTACC
CAAGAACAAA AGAAAAAGGA GTAA
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| Protein sequence | MSKNSLEEAH ANISNVIYQA ILNPHFNKET IVQICDASKQ NSFAGLCTSL ANLTIARERL
GSKSTTKLIS VIAFPFGFIP TSNKRKEAEY AIEKGADELD LVPNYFALKE GKIELFAEEI
NQISELGIPV RVIIDANILI NSSKLSMAID ALIDAGAIGI QIGNGFGPSV SKDQTKHVSK
LVKNRCSIKA VGGIKTFDQA IEIIEAGSTY IGTSFGFEIT QEQKKKE
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