| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_04031 |
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| Symbol | nrdR |
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| ID | 4781095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | - |
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| Start bp | 372545 |
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| End bp | 373024 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640083672 |
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| Product | transcriptional regulator NrdR |
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| Protein accession | YP_001014232 |
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| Protein GI | 124025116 |
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| COG category | [K] Transcription |
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| COG ID | [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains |
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| TIGRFAM ID | [TIGR00244] transcriptional regulator NrdR |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.5904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGTGCC CATCTTGTCA AAACACAGAC AGTCGAGTTC TTGAATCTCG TTCGGCTGAT
TCTGGAAGAA GCGTAAGAAG AAGAAGGGAG TGCTTAAATT GCGACTTCCG ATTTACTACT
TATGAAAGAG TAGAAACAAC ACCAATTAAT GTTTTAAAAA GAAGCGGAGC AAAAGAATTG
TTTAATCGAA GTAAAATAAT TAATGGCCTA AACAGAGCCT GTGAAAAAAC ACTTATACAT
GGATCTAAAA TTGAATTTAT TGTTGACGAA ATAGAGCTAG AACTCCATCA AGGAGTTTGC
AAAGAGATCA AATCAATTGA GATTGGAGAA ATGGTACTTA CACATTTAAA AGATATTAAT
GAAGTTGCTT ATATCAGATT TGCATCTGTT TATAGACAAT TTAATGGAAT TAATGATTTC
ATGAAAACCC TTGAAGCACT AAAACCAATA AAAAAAGAAC AATTGGCATC AGTTATTTAA
|
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| Protein sequence | MQCPSCQNTD SRVLESRSAD SGRSVRRRRE CLNCDFRFTT YERVETTPIN VLKRSGAKEL
FNRSKIINGL NRACEKTLIH GSKIEFIVDE IELELHQGVC KEIKSIEIGE MVLTHLKDIN
EVAYIRFASV YRQFNGINDF MKTLEALKPI KKEQLASVI
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