| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_03331 |
|---|
| Symbol | leuD |
|---|
| ID | 4779613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 307138 |
|---|
| End bp | 307758 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640083599 |
|---|
| Product | 3-isopropylmalate dehydratase small subunit |
|---|
| Protein accession | YP_001014162 |
|---|
| Protein GI | 124025046 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA AGTTCCCAAA AGGTGAAATC AAATCAATAC AAGGCCGCAG CTTTACAATG
AAAGGCGATG ATATTGATAC AGACAGAATA ATTCCTGCGA GATTTCTCAA ATGTGTAAGT
TTTTCCGCTT TAGGAGAACA AGTCTTTGCG GATGATAGAA AAGAACTAAA GGGTAATCAC
CCATTTGATC TTGATCAAAA TAAAGGGGCA AATATTCTTG TTGTCAATGA CAATTTTGGC
TGTGGCTCAA GTCGAGAACA TGCACCTCAG GCTCTTATGA GATGGGGGAT AAGATTAATT
ATTGGGGAAA GCTTTGCTGA AATCTTCTTT GGGAATTGCC TTGCTCTCGG GATACCTTGC
CTAACAGCCG CAAAAGAAGA AATAGTTAAC TTGCAAAACC TAGTTGAAAA AAATAACAAC
CAAATTTGGG ATTTCAATCT TAAAAACCTA TCCATTTCTA ATCAAAAAGA AACTGTCAAA
CTTTTTCTTG ATGAAGGCCC CTACAATATG CTTTTCTCAG GAAAATGGGA TGCTACCTCT
CAACTACTAG ATGAAGAAGA AAAAATAAAT AAAACATTTA ATAACTTACC TTATCTCAAT
AATTTCAAAC AAAAAATCTA A
|
|---|
| Protein sequence | MNQKFPKGEI KSIQGRSFTM KGDDIDTDRI IPARFLKCVS FSALGEQVFA DDRKELKGNH
PFDLDQNKGA NILVVNDNFG CGSSREHAPQ ALMRWGIRLI IGESFAEIFF GNCLALGIPC
LTAAKEEIVN LQNLVEKNNN QIWDFNLKNL SISNQKETVK LFLDEGPYNM LFSGKWDATS
QLLDEEEKIN KTFNNLPYLN NFKQKI
|
|---|
| |