Gene NATL1_01721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_01721 
Symbol 
ID4779444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp165918 
End bp166859 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content34% 
IMG OID640083436 
Producthypothetical protein 
Protein accessionYP_001014001 
Protein GI124024885 
COG category[S] Function unknown 
COG ID[COG4243] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.156137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACCTT CAAGACTAAA GAGTCGTCGA CGCCAAGATC TAGGTTCCAA ATGGGCGAGA 
GTTGCAATAG CTATATTATC AACAGTTGGT GTTATAGATA CAGGATCCAT AACACTAAAT
AAATGGGGGA TCATAGGAAA TTTAAACTGT CCAGGTGGAT TAGGAGGCTG CGATAAAGTT
TTAAATAGCC CTTGGGGGAC TTTCTTTCAA ACAAATAATT TCTCTATTCC ATTATCATTA
ATAGGTTTAA TTAGTTATTT ATTAATATTA TTAATGGCAA TATTCCCATT AACACCTATT
CTCAAAAACC AAAAAACTAA TATCTCAAAA GTTGCATGGT GGGGATCTTT TTATATATCT
ACATCTACTT TTATTTTCAG CTTAATTTTA ATATCAGTAA TGATATTTAA AATTAAAGCT
TTCTGTTTCT TCTGTCTTCT TTCTTTTCTT ATATCACTTT CAGTCCTATT ATTAAATATA
ATTGGAGGCA GTTGGGAAGA TTATGGTAAG TTATTTTTTA GAGGTTTTCT TATGTCAGTA
GCAGTTCTTT TAGCAGGGCT AATATGGTCA TCATCAGTCG ATCCTGCTAT CAAGGAAGTT
TCAAATAATA TTTCAGGCAT GCCACCTGCG GTAATAGCGA TAAGTTCTCC TAACAAAATA
AAACTCGCTG AACATTTAAC AGAAGAAGGA GCAGTCATGT ATAACGCTTA TTGGTGTCCA
CATTGTCATG ATCAAAAAGA AATGTTCGGG AAAGAAGCTG CAGAAAAATT AAATTTAGTT
GAGTGTGCAA AAGATGGTTT TAACAACAAA AGAGAACTTT GTGAAGCTAA AGGGATCACT
GGTTTCCCTT CTTGGGAAAT TAATGGCTCA ATTGATTCAG GAGTGAAAAG CCTAGAAGAA
TTAGCTGACC TTACCAATTA CAAAGACTCT AAAGATTTTT AG
 
Protein sequence
MGPSRLKSRR RQDLGSKWAR VAIAILSTVG VIDTGSITLN KWGIIGNLNC PGGLGGCDKV 
LNSPWGTFFQ TNNFSIPLSL IGLISYLLIL LMAIFPLTPI LKNQKTNISK VAWWGSFYIS
TSTFIFSLIL ISVMIFKIKA FCFFCLLSFL ISLSVLLLNI IGGSWEDYGK LFFRGFLMSV
AVLLAGLIWS SSVDPAIKEV SNNISGMPPA VIAISSPNKI KLAEHLTEEG AVMYNAYWCP
HCHDQKEMFG KEAAEKLNLV ECAKDGFNNK RELCEAKGIT GFPSWEINGS IDSGVKSLEE
LADLTNYKDS KDF