| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_6065 |
|---|
| Symbol | |
|---|
| ID | 4643295 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 6481234 |
|---|
| End bp | 6481809 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639809529 |
|---|
| Product | Fis family transcriptional regulator |
|---|
| Protein accession | YP_956823 |
|---|
| Protein GI | 120406994 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0601256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.104607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGGATAT TCGGGGGTAC GCACGGACGA CCCGAGCAGC AACCGCGCAC CGACGCCGAG
CTGCTGGCCG CCCACGTCGC AGGGGATCGC TACGCGTTCG AGGAACTCTT CCACCGGCAC
CACCGCCAGC TGTACCGGCT CGCACAACTG ACCAGCAGGG ACCCCGACGA CGCCGCCGAC
GCCCTGCAGG ACGCGCTGCT CGCCGCGCAC CGCACCGCAC GCACATTCCG TCATGATTCC
GCGGTCAGCA GCTGGCTCTA CCGCATCGTC GTCAACGCGT GTTTGGATCG CCTGCGCCGC
AACAGATCCC GGGCCTGCGA GGAACTCGAC GACCAGGCGG GGCCTGTCGT CGACCCGACC
GGGCGCGTCG ACACCGCCAT CGTCGTCGAA CGGGCCCTGA TGCGCCTTCC ACTCGAGCAG
CGCGCCGCAG TGGTCGCCGT CGACATGCAG GGGTACAGCA TCGCCGAGAC CGCCCGCATG
CTCGGCGTCG CCGAAGGCAC CGTCAAATCG CGCTGCTCGC GCGCCCGCAC CAAGCTCGCC
GCCTCGCTGG ACTGTTTCAC TGCCACCGCG GAGTGA
|
|---|
| Protein sequence | MGIFGGTHGR PEQQPRTDAE LLAAHVAGDR YAFEELFHRH HRQLYRLAQL TSRDPDDAAD
ALQDALLAAH RTARTFRHDS AVSSWLYRIV VNACLDRLRR NRSRACEELD DQAGPVVDPT
GRVDTAIVVE RALMRLPLEQ RAAVVAVDMQ GYSIAETARM LGVAEGTVKS RCSRARTKLA
ASLDCFTATA E
|
|---|
| |