Gene Mvan_5988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5988 
Symbol 
ID4646279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6384142 
End bp6385569 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content68% 
IMG OID639809456 
Producthypothetical protein 
Protein accessionYP_956750 
Protein GI120406921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.075136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTC ACTTTTCTGA AACGCTCGTC GCGCTGGCCG GCGGCCGCCC CGAGGTCCTG 
GCGGTGGTGC CCGGGGCACG CACCAAGTTC GTGGCGATGG GTGCCGTGGT GCTCGCCACC
GCGGCCCTCG CGGCGTTGTC GGCAGGCTTT GCGGCCAACA TGGCGCTGAA CGCGACGCTT
CCCGTCGCGG TGACGATCGG CGTGCTGTGG GGTGTGGTGA TCCTGCTGAT CGACCGGGCC
CTGGTGGTCG GGATGGGCAA CCAGCCCGCG CTGGGCCGCA ATCTCGCGAT GGCCGCACCC
CGGGTGGTGC TGGCATTGAT CCTGGGCACC GTGATCTCCA CCCCCCTGAC GCTGCACATC
TTTCACCCCG AGATCGACAC CGAAATCAAG ACGATTCAGC GCGAGGAAGC CGACGACTTC
AACAAGAGGC TCAAAGCCGA CGACCGGTTC ATCGTGATCC CCAGTCTCGA ACAGCAGGTC
GCCGACGCGA AGGCCCGCGT GGTCAGCGAC GGGGGAGCCG ACCCGGTGGT CAAGGACAAG
CAGGCCGCCT ACGACGCCGC CTACGCCGAG TATCTGCGGC TGCAGCAGTC CGCGCAGTGT
GAGCTCGACG GCACCTGCGG CACCGGACGG GCCGGCGTGG CCGAGGCCTA CCGCAACGCC
CAGGCTGCCG CGGACCGGCA ACGCGCAGTG GCCGACGCCG CGCGCAACGA ACGCGACGCC
GCCGCGGCGG CCAGCAAGGG GCAGGCCGAG AAGGACCTGG CCGACACCGA GGAACAACTC
GACGAACTAG TCCGCCAACG CGACCAACTG CAGGCCGAGT TCGACGCCCG CAACACCGAC
AACAGCGGCC TGCTGATCCG GCTGGACGCG CTGCACCGCA TCGGTGAACG CGATGCACTG
CTGGGATGGG CCCACTTGTT GCTCTGGGCG ATGTTCACCT GCATCGAACT GCTGCCGGTG
CTGATCAAGC TGTTGATGAA CATGGGTGCG TCGTCAGCCT ACGACCGGGT GCAGCAGAAC
CAGGACAACG GTGACGCCGA CGTCTTCGAT GATCAGATGC TGGCGTGGAA GGATCTGCAG
ACCGCCCGCG CCCAGGTCGG CCTGGACATC GAAACTGACC GACTCGAGCG GGAGAAGCAG
CGCGGTATCG ACATCAACAA GACGGTGTTC GAGGTCGAAG CCGACGTCAT CAAGGACACC
CTGGCGGTCT GGAGCGCGCA GGCCCGAATG CGTGCCCGTG ACCAGCTCGC CGCCTACGAA
AGCGAACTGG CCCAACAGCA GCCGGCGGCC GCGCCGACAG TCCGGTTGCA CACCACCGCA
GGCTCAGCAC CTGCCACGAC CGCTGGTGCA CCCCAGCCCG CGCGCAACGG GGCCTCGACC
AACCGTTACC TGCAGACGGG GCAGTTGCCG GACGGCGGCA TGCTGTGA
 
Protein sequence
MARHFSETLV ALAGGRPEVL AVVPGARTKF VAMGAVVLAT AALAALSAGF AANMALNATL 
PVAVTIGVLW GVVILLIDRA LVVGMGNQPA LGRNLAMAAP RVVLALILGT VISTPLTLHI
FHPEIDTEIK TIQREEADDF NKRLKADDRF IVIPSLEQQV ADAKARVVSD GGADPVVKDK
QAAYDAAYAE YLRLQQSAQC ELDGTCGTGR AGVAEAYRNA QAAADRQRAV ADAARNERDA
AAAASKGQAE KDLADTEEQL DELVRQRDQL QAEFDARNTD NSGLLIRLDA LHRIGERDAL
LGWAHLLLWA MFTCIELLPV LIKLLMNMGA SSAYDRVQQN QDNGDADVFD DQMLAWKDLQ
TARAQVGLDI ETDRLEREKQ RGIDINKTVF EVEADVIKDT LAVWSAQARM RARDQLAAYE
SELAQQQPAA APTVRLHTTA GSAPATTAGA PQPARNGAST NRYLQTGQLP DGGML