Gene Mvan_5980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5980 
Symbol 
ID4643682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6376564 
End bp6377424 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID639809448 
Producthypothetical protein 
Protein accessionYP_956742 
Protein GI120406913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACG ATAACAACGC CACAACGACT GTGGACCGCG GAATCCGTTG GGACATGGAA 
ACACAACTGG CCGCCAGCTT GCCAGGCCTG TCCGACACGG ACCTCACCGA CCTCGCGGCT
CGGGTAGGTG AGGAGCTGCA GGTCCGCGTC GGCACAGCAC TGAGTTCGGG ACTCACCAGT
CAGCAGCTCG ACGAGTTCGC GCAGCTACTC GACCGTGGCG ACGACTGCCA ACGCAATGAC
TGGCTGGAGA CTCACCGGCC CGCGTACCGG GCGGCGGTCG CCACCGTCCG GGCCGACTTG
GTTGCCGAAG TGGTCCGCAC CGTGACTGCT GCCAATCCTG CAGCAGCACA CGGTGACCGC
GTCTTCGCAC GGTTGCTTCC CACCTCGATA GAGCTGGCCG AGGCCCATTT CGACTCACAT
GGACTCAAGT ACACCCGACA CGACGCCGGA CTGCGGGTGC TGTTCGCAGG TGGCGATGAC
GACGAGACGG CGACGGTCGT CTGGGTCGAT GTTGCCGGCC GGCCGGGGGA CACGTTCACC
CTCACCGGCG CCGCTCTCGA CGTCAATTTC GCGCACGAGG ACCACGACCG CCTGTGCGCG
TTCGCCGCGG ACTGGAACAA GCGGACCTGG AATCCGAAAG CGGTCGTCGT CACCGATGAC
GACGGGCGGT GCAAGGTCAT GGGAGAGGTC GCCCTGTGTA TCGGCCCCCG GGTGGCGAGG
ACTCAGGTGG ATGTGGCGTT AAGCCGCGCC CTCGGATCGA TCTTCGCGCT GTTGGCCGAA
GCGCGCCGAA CATTCACCGG GGCGGAATCG GACACCGAAT CGACCTTGAC CGACTCCGGG
GGATCGGTGG TAGGAGTATG A
 
Protein sequence
MPDDNNATTT VDRGIRWDME TQLAASLPGL SDTDLTDLAA RVGEELQVRV GTALSSGLTS 
QQLDEFAQLL DRGDDCQRND WLETHRPAYR AAVATVRADL VAEVVRTVTA ANPAAAHGDR
VFARLLPTSI ELAEAHFDSH GLKYTRHDAG LRVLFAGGDD DETATVVWVD VAGRPGDTFT
LTGAALDVNF AHEDHDRLCA FAADWNKRTW NPKAVVVTDD DGRCKVMGEV ALCIGPRVAR
TQVDVALSRA LGSIFALLAE ARRTFTGAES DTESTLTDSG GSVVGV