| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5814 |
|---|
| Symbol | |
|---|
| ID | 4647852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 6201592 |
|---|
| End bp | 6202518 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639809290 |
|---|
| Product | acyl-CoA thioesterase |
|---|
| Protein accession | YP_956585 |
|---|
| Protein GI | 120406756 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1946] Acyl-CoA thioesterase |
|---|
| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.365462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGCC CGACCATGAA ATCCAGTCGG ACGACGATCA AGCGGCGAGG GACGAGCCGC
GATGAGGAGC CCGACCATGG GGTTAGGCAA GATACCTGCG TGTCCTCTTC GCTGGGCGAC
GTGCTCGCCT CCATGCAGCT CGACCAGGCC GGCCCGGCGG CGTTCGTCGG CAGGCAGCTG
CCCGCACCGG CCAACCACAT TCTGGGCGGC CACATCTCCG CGCAGGCGCT GCTGGCGGCC
AGCCTCACCG CACCCGGCCG CACCCCGCAC AGCGTGCACA CCTACTTCCT GCGACCCGGC
GACTCCCGGC TCACGGTCAC CTTCGAGGTG GTGAATCTTC AAGAAGGGCG CACCTTCTCG
GCGCGCCGGG TGACCGCCCG CCAGGGTGAC GAGATCCTGC TGGAGGCCAT GTCGTCGTTC
AAGTCGAGCA CCCCGAGCGC CCGACCGGTC ACCTACCAGC CCCGGTGTCC CGAAGTGGCG
CCACCGGAAT CACTGCCCCG GGTGGCGCCG CACTTCGCGG AGTCCGACGA GGTCACCAAG
GGCCAGTGGG CGAGCCTGCG CTGGTTCGAA CGCCGCATCG TCGACGCCGC CGCCGACCCG
CCCGCCCGGT CCCGGATCTG GTGGCGCCCC GACGGCGAGG TCCCCGACGA CCCGGTGCTC
ACGGCGTCGC TGGTCGCCTA CCTGTCGGCG GTGACGTTGA CCGAGCCGGC CTACGCCGCA
CGCGGCGGCG TCACCGTGTC GGCGCAGCGC GACCATTCGG TGTGGTTCCA CGCCGCGGCC
GATCTGTCGG ACTGGCTTCT CTACGAACAG TCCTCGCCCA GCAGCGCCGA CACCCTCGCA
CTGGCCAGCG GGACGATGTT CAACCGGACC GGGGAGCTGG TGTGCACGGT GCGCCAGGAG
ATGTACTTCC CGGCTTCCCG GCATTGA
|
|---|
| Protein sequence | MRSPTMKSSR TTIKRRGTSR DEEPDHGVRQ DTCVSSSLGD VLASMQLDQA GPAAFVGRQL
PAPANHILGG HISAQALLAA SLTAPGRTPH SVHTYFLRPG DSRLTVTFEV VNLQEGRTFS
ARRVTARQGD EILLEAMSSF KSSTPSARPV TYQPRCPEVA PPESLPRVAP HFAESDEVTK
GQWASLRWFE RRIVDAAADP PARSRIWWRP DGEVPDDPVL TASLVAYLSA VTLTEPAYAA
RGGVTVSAQR DHSVWFHAAA DLSDWLLYEQ SSPSSADTLA LASGTMFNRT GELVCTVRQE
MYFPASRH
|
|---|
| |