| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5812 |
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| Symbol | |
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| ID | 4647850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | - |
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| Start bp | 6199388 |
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| End bp | 6200230 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639809288 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_956583 |
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| Protein GI | 120406754 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.439013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGG TTTCGTTAAT CACAGGCGGT GCGGGCGGCA TGGGTCTGGC CACGGCCAAG
GTGGTCGGTC AGGACCGTGC GGTGGTGCTG TGCGACGTCC GGCAGGACCG GCTCGACGGC
GCGGCGGCGG CGCTGAAAGA CCTCGGCGTG GCCGTCACCG CGGTCAACTG CGACGTGACG
GACCGCCGGG CCGTCGACGC GCTGTTCGAG ACGGTGTCGA GACTCGGCAC GCTTGTCTCG
GTGATCCACA CCGCGGGCGT GAGCCCCAGC ATGGGTGACG CCGAGTACGT CATGCGGACC
AACGCGCTGG GCACGCTCAA CGTCGACGAG GCGTTCTACG GGGCGGCGAC CGACGGCGCC
GCGATCGTCA ACGTGGCATC GATGGCGGCC TACCTGCTGC CGGCCGAGCT GATCCCGACG
TCTGCGTTCC CGCTGGCGTT GCAGGACACC GAGGCGTTCA TGACCGAGAT GCTGGCGGCG
TGCGCGATCG CTCCCGAGGA AGCCCGGTCG GGCATCTCAT ACGCGATCAG CAAGAGCTTC
GTCCGCTGGT ACAGCAGCTC GCAGGCCGAA CGGTTCAACG GTCGCGGTCT GCGTATCGTG
TCGGTCTCGC CGGGGTCCGT CGACACCGAG ATGGGCCGGC TGGAAGAGCA GGCCGGCGCG
GGCGCGATGG TCGCCGACGC CGCGGTCCCG CGCTGGGGCA AGCCGGAGGA GATGGCAGAA
CTGCTGGCCT TCTGCGCCGG CGACAAAGCC GGTTACCTCA CCGGCACCGA CATCCTCAAC
GACGGCGGAG TGGTGGCCTC GATGACCGAA AGGGCCCGGC TCGCCGCCGC TTCGAGCAGC
TGA
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| Protein sequence | MTAVSLITGG AGGMGLATAK VVGQDRAVVL CDVRQDRLDG AAAALKDLGV AVTAVNCDVT
DRRAVDALFE TVSRLGTLVS VIHTAGVSPS MGDAEYVMRT NALGTLNVDE AFYGAATDGA
AIVNVASMAA YLLPAELIPT SAFPLALQDT EAFMTEMLAA CAIAPEEARS GISYAISKSF
VRWYSSSQAE RFNGRGLRIV SVSPGSVDTE MGRLEEQAGA GAMVADAAVP RWGKPEEMAE
LLAFCAGDKA GYLTGTDILN DGGVVASMTE RARLAAASSS
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