Gene Mvan_5772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5772 
Symbol 
ID4643729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6163099 
End bp6164547 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content70% 
IMG OID639809248 
Producthypothetical protein 
Protein accessionYP_956543 
Protein GI120406714 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.927305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00684565 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCTGCAGG GCCGATTCGT CGGTGAGCTC CCGGAGCTGG CGGTGCCGTG GAAGGCCGAG 
GCGGCGCCGC AGCCGCAGTT GCTCGTGGTC AACGAGCCGC TCGCCGCCGA GCTCGGTGTC
GATGCGGACT GGTTGCGCGG CCCGGACGGG CTGGGCTTGT TGACCGGCAC GGTCGTGCCC
TCGGATGCCA CCCCCGCGGC GCAGGCCTAC GCGGGCCATC AGTTCGGCGG GTACCAGCCG
CGGCTCGGTG ACGGTCGCGC GCTGCTGATG GGCGAGTTCG TCGACAGCAC CGGCCGGCTA
CGCGACCTGC ATCTCAAGGG TTCGGGGCGG ACACCGTTCG CCAGGGGCGG CGACGGACTG
GCCGCGGTCG GCCCCATGCT GCGGGAGTAC GTGATCAGCG AGGCGATGCA CGCCCTCGGC
ATCCCGACCA CGCGGGCGCT GGCGGTGGTG GCCACCGGTC GCCCGGTGTA CCGGGACACG
GTGCTGCCCG GCGCCGTGCT CGCGCGGGTC GCGTCGAGTC ATCTGCGGGT CGGCACGTTT
CAGTACGCCG CCGCGGTGTC GGCGCGCGAG GGCAACGTGG ACCTGTTGCG CAGGCTCGCC
GATCACGCGA TCGCACGGCA TCATCCCGCG GCCGCCGTAG CCGAGAACCG CTACCTGGCG
CTGCTCGACG CCGTCAGCGC TGCGCAGGCC AAGCTGGTCG CCCAGTGGAT GCTGGTGGGC
TTCGTGCACG GCGTGATGAA CACCGACAAC ATGACGATCT CGGGCGAGAC GATCGACTAC
GGACCGTGCG CGTTCATGGA GGCCTTCGAT CCCGCGACGG TGTTCAGCTC GATCGACAGC
TCGGGCCGTT ACGCCTACGG GAACCAGCCC GCGATCACGT TGTGGAACCT GGCGCGGTTC
GCCGAGACGC TGCTTCCGCT GATCCACGAG AACTCCGGCG CGGCGATCGC GTTGGCCGAG
GCTTCCCTGG ACTCCTTCGC CGGGCTGTAC GAGACGGCGT GGACGGACGG GATGCGCGCG
AAGCTCGGGG TGCCGGGTGC GCCGGCCGAG TCGGTGACGC CCCTGATCGA GCAGTTGCTG
CCCCAGATGC AGCAGAGCCA TGTCGACTAC ACGTTGTTCT ACCGGCTGCT GGCCGGTGCG
GCCCGCGGTG ACGCCGAGCC GGTGCGCGGC GAGTTCATCG ATCTCGCCGC CTTCGACGAA
TGGCTGGGCC GCTGGCGTGC CCTGGAACCG GACCCCGCCG TGATGGACCG GGTCAATCCC
GTCTACATCC CGCGTAACCA TCTCGTCGAG GACGCGCTCA CCGCGGCCAC CGGCGGTGAC
CTGGGACCGC TGCAGCAACT GCTCACGGCG GTCACCGCCC CCTTCGAGGA GCGGCCGGGA
TCGGAGCGGT TCGCCGAACC CGGAGAGAAG GAGTTCAGCG CCTCGTTCCA AACTTTCTGT
GGAACGTGA
 
Protein sequence
MLQGRFVGEL PELAVPWKAE AAPQPQLLVV NEPLAAELGV DADWLRGPDG LGLLTGTVVP 
SDATPAAQAY AGHQFGGYQP RLGDGRALLM GEFVDSTGRL RDLHLKGSGR TPFARGGDGL
AAVGPMLREY VISEAMHALG IPTTRALAVV ATGRPVYRDT VLPGAVLARV ASSHLRVGTF
QYAAAVSARE GNVDLLRRLA DHAIARHHPA AAVAENRYLA LLDAVSAAQA KLVAQWMLVG
FVHGVMNTDN MTISGETIDY GPCAFMEAFD PATVFSSIDS SGRYAYGNQP AITLWNLARF
AETLLPLIHE NSGAAIALAE ASLDSFAGLY ETAWTDGMRA KLGVPGAPAE SVTPLIEQLL
PQMQQSHVDY TLFYRLLAGA ARGDAEPVRG EFIDLAAFDE WLGRWRALEP DPAVMDRVNP
VYIPRNHLVE DALTAATGGD LGPLQQLLTA VTAPFEERPG SERFAEPGEK EFSASFQTFC
GT