Gene Mvan_5762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5762 
Symbol 
ID4643719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp6150198 
End bp6151358 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content70% 
IMG OID639809238 
Productalcohol dehydrogenase 
Protein accessionYP_956533 
Protein GI120406704 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.117069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.104571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG TCAGTTGTGT ACACGGCACT TTGGAGGTCG TCGACCTGCC CTCCCCCCGT 
CCCGGCGAGG GGCAGTTGGT GCTCGACGTG CTGCGCTGCG GCATCTGCGG ATCGGATCTG
CACGCCAAGG ATCACGCCGA CGAGCTCACC GAGGTGATGG CCGAGGGCGG CTACCACGAC
TTCGTGCGCA GCGACACCCC GGTGGTGATG GGTCACGAGT TCTGCGGCGT GGTCGCCGAC
CGTGGCCGCA AGGTGGGCAA GGAGTTCAAG CCGGGTTCGA CGGTGGTGGC GTTCCCGCTG
ATGCGCGCCC ACGGCGGAGT GCACCTGACC GGGCTGTCCC CGCTGGCACC GGGCGGCTAC
GCCGAGCAGG TGGTCGCCGA GGCCGCGCTG ACGTTCGTGG TGCCCAACGG ACTCGATCCG
GCCACCGCCG CGCTCACCGA ACCGATGGCG GTGGCCTACC ACGCGGTGCG GCGCAGCGAC
GTCACGACCA AGGACGTCGC GATCGTGCTC GGCTGTGGCC CGGTCGGGCT GGCGGTCATC
TGTCACCTCA AGGCACTGGG GGTGCGCACC ATCGTGGCGA GCGATTTCTC GCCGGGGCGA
CGGGCACTGG CCGCCCGTTG CGGGGCCGAC GTCGTCGTCG ACCCGGCCGT CGATTCGCCG
TACGAGGCGG TGCCCGCCAA GCAGCGCGGC CTCACCGAAC TCCCGGCGCT CTACGAACTC
GGCGTGGGGT CGATGGAGAA GCTGCGCAAG ATCCCCGGGT GGTCGCACGT GTACCGGGTC
GCCGACCGCC TCGGCGGCAC CGCGCCGAAG CGGCCGGTGA TCTTCGAGTG TGTCGGGGTG
CCCGGCATGA TCGACGGGAT CATCGGTGCC GCACCGCTGG CCTCCCGCGT CGTCGTGGTC
GGCGTGTGTA TGGGTGACGA CAAACTTCGT CCCGCGATGG CGATCGGCAA GGAGATCGAT
CTGCGCTTCG TATTCGGCTA CACCCCTTTG GAATTCCGGG ACACGCTGCA CATGCTCGCC
GACGGCAAGC TCGACGCGTC GGCATTGGTG ACGGGCACGG TCGGGCTCGG CGGTGTCGCC
GCGGCGTTCG ACGCGCTCGG CGACCCCGAG ACCCACGCCA AGATCCTGAT CGACCCGGCC
GGCACGGCGG TCACGCCTTA G
 
Protein sequence
MKAVSCVHGT LEVVDLPSPR PGEGQLVLDV LRCGICGSDL HAKDHADELT EVMAEGGYHD 
FVRSDTPVVM GHEFCGVVAD RGRKVGKEFK PGSTVVAFPL MRAHGGVHLT GLSPLAPGGY
AEQVVAEAAL TFVVPNGLDP ATAALTEPMA VAYHAVRRSD VTTKDVAIVL GCGPVGLAVI
CHLKALGVRT IVASDFSPGR RALAARCGAD VVVDPAVDSP YEAVPAKQRG LTELPALYEL
GVGSMEKLRK IPGWSHVYRV ADRLGGTAPK RPVIFECVGV PGMIDGIIGA APLASRVVVV
GVCMGDDKLR PAMAIGKEID LRFVFGYTPL EFRDTLHMLA DGKLDASALV TGTVGLGGVA
AAFDALGDPE THAKILIDPA GTAVTP