Gene Mvan_5598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5598 
Symbol 
ID4646142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5976551 
End bp5977345 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID639809071 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_956369 
Protein GI120406540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1174] ABC-type proline/glycine betaine transport systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTTCC TGCAGGAGGC GCTGTCGTTC ATCTTCACCG CGGCGAACTG GGGCGGCCCC 
GCGGGTCTGA GCGCACGCAT CCTGGAGCAC CTGCAGTACA CCGTCATCGC GGTGTTCTTC
TCGGCCGTCA TCGCGGTCCC GCTCGGAATG CTGATCGGGC ACACCGGCCG CGGCACGTTC
GTCGTCGTCA CCGGCGTCAA CGCGTTGCGG GCGCTGCCCA CGCTCGGGGT GTTGTTGCTG
GGTGTCCTTC TGTGGGGGCT GGGTCTGATC CCGCCCACGG TGGCACTGAT GCTGCTCGGC
ATCCCCCCGC TGCTGGCGGG CACCTACTCC GGCATCGCGA ACGTGGACCG GGACGTGGTC
GACGCCGCCA GGGCGATGGG GATGACGGAG TCACGGATCC TGCTGCGGGT CGAGACACCG
ATCGCGATGC CGTTGATCCT GGGCGGGCTG CGCACCGCCA CGTTGCAGAT CGTGGCGACC
GCCACCGTCG CGGCGTACGC CAGCCTGGGC GGGTTGGGCC GATACCTGAT CGACGGCATC
AAGGTGCGGG AGTTCTACCT TGCGCTGGTG GGGGCCCTGA TGGTCACCGC GCTGGCGCTG
ATCCTCGATG CGGCACTCGC GTTCGCGGTG TGGGCTTCGG TCCCGGGGTC GGGCAGACTG
CACCGGTCGG GCTCGATGCC GCAGCCGTTG CTCGGCGACG AGGTGGCGCT GGAATCGCGT
TCGCGGGCCG GTCGACGGCC CGATTCGGAA GCCCGCCACG AGCGAGGCAA CCCTTCGCCT
ACGGTAGAGG CATGA
 
Protein sequence
MNFLQEALSF IFTAANWGGP AGLSARILEH LQYTVIAVFF SAVIAVPLGM LIGHTGRGTF 
VVVTGVNALR ALPTLGVLLL GVLLWGLGLI PPTVALMLLG IPPLLAGTYS GIANVDRDVV
DAARAMGMTE SRILLRVETP IAMPLILGGL RTATLQIVAT ATVAAYASLG GLGRYLIDGI
KVREFYLALV GALMVTALAL ILDAALAFAV WASVPGSGRL HRSGSMPQPL LGDEVALESR
SRAGRRPDSE ARHERGNPSP TVEA