| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5537 |
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| Symbol | |
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| ID | 4645976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 5917941 |
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| End bp | 5918948 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639809010 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_956309 |
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| Protein GI | 120406480 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCGCC GACACCGCAT ACTGCCGATC GCGCTGGCTG CGGTCCTTGC CCTGGTCGCT
CCCCTGACGC CCGCGGTCGC CGCGCCCGGC GATCCCGTCG CGGCATCGGT GCAGGTGGAA
CCCGCCGTGG TCCGCATCGA CACCGAAGTC GACTATCAGG GGGTGGTGGG CCTCGGTACC
GGGATCGTGC TCGACCCCGC GGGCCAGGTG CTGACCAACT TCCACGTCGT CCAGGGCGCC
GACCGCATCA CCGGAACGGT CGCCGGCCGC GCGTACCCCG CCCAGCTCGT CGGATATGAC
CGCAAACGCG ATGTCGCGGT CCTGCAGCTG ATCGGCGCCA ACGGACTTGC GGCGGCGCCC
ATCGGCGACG CCTACGCCCT CGTCCCGGGC CAGCCCGTGG TCGCTCTCGG TAACGCGATG
GGGACCGAGG CGCCACTGAC CCGTGAGGTA GGCACCTTGA CGGGTTTCGG GCGGACCGTG
CAGGCCGAGG ACACGCTGAC CGGCACCTCC GATGAGCTGA CCGGCCTCTT CGAGTTCGCC
GCCCCGGTGC GCGCAGGTGA TTCCGGCGGC CCCGTGGTCA ACGATCTCGG CCAGGTGGTC
GGCATCACCA CCGCGGCGTC CGTGAACTTC CGGATGGGTC CCGGCGGTAA GGGCTTCGCG
ATCCCGATCA ACGACGCGAT GGGCGTGGCC GGCCAGATCC GCGGCGGCAT CCGCTCGGAC
AGCGTCCACA TCGGTCCACC CACATTGCTC GGCGTCGGCG TCCGTACCGC GCCGCGTGAC
GAGCCGGGCG TCCTGATCCA GGAAGTCATG GTGGGCGGGC CGGCCGACCT GGCCGGGTTG
CGCGCGGGTG ACATCCTCAT CGAGCTCGAC GGCACCCCGC TGGATTCGAC CAACACGCTG
ACCTCGGTGC TCGACAGGCA CTACACCGGC GACGTCCTCG ACCTGACGTG GGTCGACAGC
ACGGGGGTTA CCCGAGACGG CAAGGCGGTC CTCACCCCGA CCGTCTGA
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| Protein sequence | MIRRHRILPI ALAAVLALVA PLTPAVAAPG DPVAASVQVE PAVVRIDTEV DYQGVVGLGT
GIVLDPAGQV LTNFHVVQGA DRITGTVAGR AYPAQLVGYD RKRDVAVLQL IGANGLAAAP
IGDAYALVPG QPVVALGNAM GTEAPLTREV GTLTGFGRTV QAEDTLTGTS DELTGLFEFA
APVRAGDSGG PVVNDLGQVV GITTAASVNF RMGPGGKGFA IPINDAMGVA GQIRGGIRSD
SVHIGPPTLL GVGVRTAPRD EPGVLIQEVM VGGPADLAGL RAGDILIELD GTPLDSTNTL
TSVLDRHYTG DVLDLTWVDS TGVTRDGKAV LTPTV
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