Gene Mvan_5465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5465 
Symbol 
ID4645204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5847378 
End bp5848235 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content69% 
IMG OID639808941 
ProductXRE family transcriptional regulator 
Protein accessionYP_956241 
Protein GI120406412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.140263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCGA ACGTGGCCGA CGCCAACCGC GAACTCGCGG ATTTCCTCAA ACGCGCCCGC 
AGCGCGGTCG ATCCGGCGCG GGCAGGCCTG CCTGCCGACG GCCGGATCCG CCGGGTACCG
GGCCTGCGTC GGGAGGAGGT GGCGCTGCTG GCGGGCGTCT CGACCGACTA CTACGCGCGT
CTGGAGCAGG GCCGGCGGAT CACCCCGTCG GCGGCGGTGC TCGATGCGAT TGCCCGGGCC
CTGGATCTCG GCGACACCGG CCGGGCCCAC CTGGGCCGTC TCGTCGGTGC GTCGCCGACG
CGCCGCAGGT CCTCGCGGCC GGTGCAGCGC GTCAGACCCG GGCTGTACCA ACTGCTGGAC
TCGCTGGACG AGACGCCGGC GATGATCCTC GGCCGGCGCA CCGACGTGCT GGCCACCAAC
CGCGCCGCCC GCGTGCTGTT CGCCGACTTC GACGCGATGC CCCCTCGTGA GCGCAACTAC
GCGCGGTGGA TGTTCACCTC GGAGCAGGCG CGAAACTTGT TCGCGGACTG GTCTGTTCAG
GCCCGAACTG CTGTCGAGAA CCTGCGCCTG GATTTCGGCG GCGACCCGCA CGATCCGGCC
GTCATCGAAC TCGTCGACGA ATTATCTGCT GCCAGTGCGG AATTCCGGAT GTGGTGGGCC
GAACACCGGG TATTCCAACG GACGTACGGA ACCAAGCGGT TGCGGCACCC GGTCGTGGGC
GACCTGTCGG TCGACTACGA GACCTTCACG ATGCCCGGTG ACGCGGAGCA GACGCTGTTC
GTCTACCTCG CCGAAGCGGG GAGCCCGTCC CGCGACGCGC TGAACCTGCT GCTGAGCTGG
AGTGCGAATT CGGTGTAG
 
Protein sequence
MMANVADANR ELADFLKRAR SAVDPARAGL PADGRIRRVP GLRREEVALL AGVSTDYYAR 
LEQGRRITPS AAVLDAIARA LDLGDTGRAH LGRLVGASPT RRRSSRPVQR VRPGLYQLLD
SLDETPAMIL GRRTDVLATN RAARVLFADF DAMPPRERNY ARWMFTSEQA RNLFADWSVQ
ARTAVENLRL DFGGDPHDPA VIELVDELSA ASAEFRMWWA EHRVFQRTYG TKRLRHPVVG
DLSVDYETFT MPGDAEQTLF VYLAEAGSPS RDALNLLLSW SANSV