Gene Mvan_5462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5462 
Symbol 
ID4645201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5843857 
End bp5844606 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID639808938 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_956238 
Protein GI120406409 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.802601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCC CCTTCACACC CCCGGAAAAC CCGTTCGACC GCCGAGGATT CGGGTTCGGA 
TTTGGGCCGG AAGGCCGCCG CACCGTGCAC GAACGTCGTC GTCAGGCCCG TCGGGAATTC
CACGACCACA TTCGCGAGCA TCGCGGCGAT GCGGGCTTCG GCCCCGGCCC CGGCGGATTC
GGCCCCGGCG GATTCGGCCC TGGCTTCGGC GGCTTCGGCC CCGGCGGCGG CAAGTTCGGC
CCCGGCTTCG GATTCGGCCC CGGCGGCCGA GGAGGCCGGC GCGGCGGACC CCGCGGCGGC
GGGCGCAGCA GGCGCGGAGA CGTGCGCGCC GCGATCCTCA AACTGCTCAC CGACCGGCCG
ATGCACGGCT ACGAGATGAT CCAGGAGATC AACGATCGCA GCCAGCAGCT CTGGAAGCCG
AGCCCCGGCT CGATCTACCC CACCCTGCAG TTGCTTGTCG ACGAAGGTCT GCTGACGGCC
GCCGAAACCG AGGGCAGCAA AAAGCTTTTC GAGCTGACCG AGGACGGCCG TGCTGCCGCC
GAGAAGATAG AGACCGCGCC GTGGGACGAA ATCACCGAGG CCTTCAAGGA CGAAGCTCCG
GAGGCGATGG GCCTGCGCAC TGCCGTCGGC CAGCTGATGG GTGCGGTCGC GCAGTCGGCG
CACGCGGCTA CGCCGGAACA GCAGCAGCGC ATCGTCGACA TCGTCAACAA TGCGCGCCGC
GAGATCTACC AGATCCTGGG CGAGGACTGA
 
Protein sequence
MNTPFTPPEN PFDRRGFGFG FGPEGRRTVH ERRRQARREF HDHIREHRGD AGFGPGPGGF 
GPGGFGPGFG GFGPGGGKFG PGFGFGPGGR GGRRGGPRGG GRSRRGDVRA AILKLLTDRP
MHGYEMIQEI NDRSQQLWKP SPGSIYPTLQ LLVDEGLLTA AETEGSKKLF ELTEDGRAAA
EKIETAPWDE ITEAFKDEAP EAMGLRTAVG QLMGAVAQSA HAATPEQQQR IVDIVNNARR
EIYQILGED