| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5449 |
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| Symbol | |
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| ID | 4644562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium vanbaalenii PYR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008726 |
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| Strand | + |
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| Start bp | 5828985 |
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| End bp | 5831774 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639808925 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_956225 |
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| Protein GI | 120406396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.651418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA GTGCCCAGCC GATCCGCCCA AGCCAGGAGT CCCAGGTGGA ACTTGTCGGC
CGCCGCGCGG AACGCCGCGC GCTCGACGGC GTGCTGTCCG CGGTGAGTGC CGGCCGCAGC
GGGGTGCTGG TCCTCAGCGG GGTGCTGGTC CTCAGCGGGG AGGCCGGTAT CGGCAAGACG
GCGCTGCTCG ACGAGGTGGC CGGGCAGATC GCCGAAGGCC TGTTGGTCCG GGTCGCCGGC
GTGGAATCCG AGACGGAGTT CGCGTACGCC GCACTCCACC AACTCTGCAT CCCGCTCTTC
GAGCGCATCG AGCAGATCCC GGGTCCGCAG CGTGCAGCGC TGCTCACGGC GTTCGGGCAA
CGTCGGAGCC CGACGCCGGA CCCCTTCCTG GTGGGTCTCG CCGTGCTGAG CCTGGTGTCG
GAGTTCGTGC ACCAATGCCC TGTCTTCTTG ATCATCGACG ACCAGCAGTG GCTCGACCGG
GCGTCGAGTA TCGCGATCGC ATTCGTCGCG CGTCGGCTCT CCGCCGAACC CGTCGGTGTC
GTGTTCGCGA CCCGGACGGT CGGCGAGGAG CTGCGCGGCC TACCGGAACT GGTCGTTGGC
GGCCTGACTG ACGATGACTC GCGTGAACTG TTGGCGCTGA ACCTCGACGG TCCACTGGAC
ACGAGTGTCC GCGACCGGAT CATCGTCGAA GCTCGAGGTA ATCCGCTGGC GTTGCTGGAA
ATACCCCGCG CCCTGGGCCG CACCGGTCTG GCGGGCGGAT TCGGCGCACC CGGCGTGCCG
CTGACACACA GCCTGGAAGG CGCCTTCCGT CACCAGCTCC ACGGCCTACC GTTGCCGACG
CGCAGGCTGC TGGCGCTGGC CGCCGCGGAA CCGGCCGGGG ACGCGTCGAC GCTGTGGCGG
GCGGCCGAAG TGCTCGGCAT CGAGACGAAT GCCGCGGTGC CCGCGGTGGA GGCCGGGTTG
GCAGAGATCG GTAGCCGCGT CCGGTTCCGT CATCCCCTCA TCCGCTCCAC CGCATATCGA
TCCGTCGCGC TGTCCGACCG GCAGTTGATC CACAGCGCGC TGGCCGCGGT CATCGACCGT
GAGCTCGACC CGGACCGTCG CGCGTGGCAT CTCGGTCACG CCGCCATCGG CCCGGACGAC
GAGGTGGCCG CGGAACTGGA ACGCTGCGCG ACCAGAGTGC GTGCGCGCGG CGGTGTCGCC
GCTGCGGCCG CATTTCTGGA ACGGGCGTCG GCGTTGACCC TCGACCCGTC GAACCGGTGC
GACCGAACGA TCGCCGCGGC GTCGGCGAAA GCACAGGCGG GGGCGCTGGA CGTCGCAAAA
GACCTGCTGA AGGTCGCCGA CGCCGCACCG ATGACCGAAC TTCAACGCGC CCAAGCCGAT
CTCGTCCGTG CCCAGCTCGC GTTCATCAGC AACCACGGGA ACGATGCGGC CCCGCTGCTC
CTCGGCGCCG CCCGAAGACT CGAGAGCATC GATCCGACGC TGGCACGCGA AACCTACCTC
GACACACTGT CCGCGGCGAT CTTCGCCGGA CGTCTTGCGG TCGATGGCGG AGTGCTCGAG
GTGTCCGAGG CGGCCAGCGC AGCCACCCGG TCACTGAACA CCCCCGGCGC GGCGGACCTT
CTCCTCGACG GGATGACCAC ACAACACAGC GCAGGTTTCG AAAAGGGCCT GCCCAACGTG
CGCGAAGCAC TGCGCATCTA CGGCCCGGGC ATGACCACCG AGCAGGAGCT GCGTTGGATG
TTCCTGGCAT GTGTCGCGGC GGCACACGTC TGGGATCTGG ACCGGCTGAT GTCGTTGGCG
GTCCGTCACG TTCAACTCTC CCGAGACACC GGGGCGGTCA GCGAGCTTCC CCTGGCGCTG
AGTTGCCTCA TCACGCCGCT GCTGTTTACC GGGAGGTTCG GCGAGGCCGC ACGCGCCATC
GACGAACTGA CGGCAGCGAT CGACGCCATG GGCAACAACC TGACCCCGTA CGGTGCCCTC
AGCCTGGCCG CGATGAGCGG CCGCCGGGAC CACCTTCAGC GACTGGGATC GACGGCCATC
CATAACGCCG AACATCGCGG CGAGGGCATC GGTTTGACTG TGAACGCTTG GGCGACAGCT
CTTCTGGAGA ACGGCCATGG CAGGTACCAC GCGGCGGCGG AGGCCGCTGT CTACGCCACC
TCCTATCCCG GTGACTGCAC ATCGGCGGGT TGGGCCCTCA TCGAGCTCGT CGAGGCCGGC
TCCCGAACCG GCGATGACGC CGTCGCCTCC GCCGCCCTCG AACGACTGAC GGAGATGACG
ACACCGAGCG GTACGGACTG GGGGCTCGGC GTCGAGGCGC GATCCCGCGC GTTGACCACC
GAAGGCGACG CCGCTGAAGC CTTGTATCTG GAGGCGATCG AACGCCTCGG GCGCGCAGGG
ATGGGGCCGG ACCAGGGCCG GGCTCATCTG CTGTACGGCG AATGGTTACG CCGTCGCCGC
CGGCGCGTGG ACGCGCGGGC CCAGTTGCGC AGTGCGCATC ATCTTTTCGA CTCGATCGGG
ATGGACGCCT TCGCAGAGCG GGCCCGGGTG GAACTCCTGG CCACCGGGGA GACGGCACAG
AAGCGCACCA ATTCCCGGGT GGCCGCGCTG ACGGCGCAGG AGGCGCAGAT CGCCCGGCTG
GCCAGGGACG GGCTGTCCAA CCCGGAGATC GGGGCGCGCC TGTTCATCAG CGCGAGAACC
GTGCAGTACC ACCTGAGCAA GGTGTTCGCG AAGCTGGGGA TCAGGTCACG CAGCCAACTC
GAACACTCGC TGCCCGAGCT CGCCACCTGA
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| Protein sequence | MTSSAQPIRP SQESQVELVG RRAERRALDG VLSAVSAGRS GVLVLSGVLV LSGEAGIGKT
ALLDEVAGQI AEGLLVRVAG VESETEFAYA ALHQLCIPLF ERIEQIPGPQ RAALLTAFGQ
RRSPTPDPFL VGLAVLSLVS EFVHQCPVFL IIDDQQWLDR ASSIAIAFVA RRLSAEPVGV
VFATRTVGEE LRGLPELVVG GLTDDDSREL LALNLDGPLD TSVRDRIIVE ARGNPLALLE
IPRALGRTGL AGGFGAPGVP LTHSLEGAFR HQLHGLPLPT RRLLALAAAE PAGDASTLWR
AAEVLGIETN AAVPAVEAGL AEIGSRVRFR HPLIRSTAYR SVALSDRQLI HSALAAVIDR
ELDPDRRAWH LGHAAIGPDD EVAAELERCA TRVRARGGVA AAAAFLERAS ALTLDPSNRC
DRTIAAASAK AQAGALDVAK DLLKVADAAP MTELQRAQAD LVRAQLAFIS NHGNDAAPLL
LGAARRLESI DPTLARETYL DTLSAAIFAG RLAVDGGVLE VSEAASAATR SLNTPGAADL
LLDGMTTQHS AGFEKGLPNV REALRIYGPG MTTEQELRWM FLACVAAAHV WDLDRLMSLA
VRHVQLSRDT GAVSELPLAL SCLITPLLFT GRFGEAARAI DELTAAIDAM GNNLTPYGAL
SLAAMSGRRD HLQRLGSTAI HNAEHRGEGI GLTVNAWATA LLENGHGRYH AAAEAAVYAT
SYPGDCTSAG WALIELVEAG SRTGDDAVAS AALERLTEMT TPSGTDWGLG VEARSRALTT
EGDAAEALYL EAIERLGRAG MGPDQGRAHL LYGEWLRRRR RRVDARAQLR SAHHLFDSIG
MDAFAERARV ELLATGETAQ KRTNSRVAAL TAQEAQIARL ARDGLSNPEI GARLFISART
VQYHLSKVFA KLGIRSRSQL EHSLPELAT
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