Gene Mvan_5437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5437 
Symbol 
ID4644549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5815614 
End bp5816072 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content71% 
IMG OID639808912 
Productendoribonuclease L-PSP 
Protein accessionYP_956213 
Protein GI120406384 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.491285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCT GGTCGGAGCG GCTGGACGAG CTCGGCATCG CGCTGCCCGA GGTCGTCGCG 
CCGCTGGCGG CGTATGTGCC CGCGGTCCGC ACCGGCAACC TGGTCTACAC CGCCGGCCAG
TTGCCGATCT CCAACGGTGA GCTGGCCGCG ACCGGCAAGG TCGGCGCCGA GGTGTCCGCC
GAGGACGCGA AGCACCTGGC CCGCCGGTGT GCGCTCAACG CGCTGGCCGC CGTCGATGCG
CTGGTCGGCA TCGACTCGGT GGTCAAGGTC GTCAAGGTCG TCGGCTTCGT CGCCTCGGCA
CCGGGATTCG ACGGTCAGCC CGGCGTCATC AACGGCGCCT CGGAGCTGTT CGGTGAGGTG
TTCGGCGAAG CCGGCGCGCA CGCGCGGTCG GCGGTCGGGG TGTCCGAGCT GCCCCGCAAC
GCTCCGGTGG AAGTGGAAGT GATCGTAGAG GTCTCCTAG
 
Protein sequence
MSGWSERLDE LGIALPEVVA PLAAYVPAVR TGNLVYTAGQ LPISNGELAA TGKVGAEVSA 
EDAKHLARRC ALNALAAVDA LVGIDSVVKV VKVVGFVASA PGFDGQPGVI NGASELFGEV
FGEAGAHARS AVGVSELPRN APVEVEVIVE VS