Gene Mvan_5400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5400 
Symbol 
ID4648080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5783713 
End bp5784795 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID639808876 
Producthypothetical protein 
Protein accessionYP_956177 
Protein GI120406348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.573338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.21487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACG ACTGGTTGCT CGTGGAAACA CTGGGCACCG AGCCCGTCGT GGTCGCACAT 
GGCGCTTACA CCAAGAACCT CGTCCCCGTG GCGACCTACC TGCGCCGCAG TCCGCACCTG
ATGGCCATCC AGACCGCGAT CGGCGAGACG GTCCGCGGTG GCGGCGGCCT GAGCAGCATC
ACCCCGAAGA ACGACCGGGT GATCCGCACC GAGGTGGTGC AGATGTCCGA CGGCCGGATT
CACGGCGTCC AGGTCTGGGT CGGCGCACCC GACGAGTCCC CGCCCGAACG CCCGCTGGTG
GGCCCGCTGT TGTGGGACCT CACGGCGGGA ACGGCCACCG ACACCACCGA GTCGCTGCGG
GTGGGTGGAT GGGATCCGGC GAACCAGTCC ACACACGGGC GCGCCTTCGC CGATGATCTG
CCGCGCCGCG ATCTGAACCC GAACGAGGCC GAGGTGCTCA GCATGGTGAT CAAGCCCGAG
GCGGGCGTGA CGCTGTGCAA CACCTGGGAC GTCACGGACT ACCGCGGCCA GCCCATCACG
GTCGGGTTCG TGGCCCGGTC ACTGCCGGAG GCGTTGGAGG ACGGCGGCGA ACGGTTGATC
TGCCGCGCCA TGAACTGGCG CAGCGTCCGC GAGGGCGCGA GCCTCCAGCA CGACCTGCTG
GGCCAGCGGA TCGTCGACGG CCTGCGCCAG CCCGGCGTGT ACCGGGCGTT GGTGGATCCA
CGGAACTGGA CGTTGCTCAA GTGGCTCGAC GAGCCGGTGC CGTTCCTCGA CCGGCACGCC
AACAGGGAGA GCGAACAGGC TATCCACCCG CAGGACATGC ACGTGATGTC GGCGATGGCC
GATCAGTTCG CGACCGGTGT CGCCAGTGGG GTGCTGAGGC TGGTCGGGCA CAACGGTGGC
TGGACTCCGG TGCATGTGAC GGTCAACCGG GTGAAACTCG GCAAGGGTGT GTACGCCGGG
CTCGCGTCAC TGCGGAAGCC CACGCCCGCC GAGCTCACCG CCGCGGGCCT CGACTGCGCG
CCGGAGAGCA CGGGACGAAG ACCGAAAGCA CTGTCCCGCA AGGACAAAGC GAGCCGGGCC
TAG
 
Protein sequence
MTHDWLLVET LGTEPVVVAH GAYTKNLVPV ATYLRRSPHL MAIQTAIGET VRGGGGLSSI 
TPKNDRVIRT EVVQMSDGRI HGVQVWVGAP DESPPERPLV GPLLWDLTAG TATDTTESLR
VGGWDPANQS THGRAFADDL PRRDLNPNEA EVLSMVIKPE AGVTLCNTWD VTDYRGQPIT
VGFVARSLPE ALEDGGERLI CRAMNWRSVR EGASLQHDLL GQRIVDGLRQ PGVYRALVDP
RNWTLLKWLD EPVPFLDRHA NRESEQAIHP QDMHVMSAMA DQFATGVASG VLRLVGHNGG
WTPVHVTVNR VKLGKGVYAG LASLRKPTPA ELTAAGLDCA PESTGRRPKA LSRKDKASRA