| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5268 |
|---|
| Symbol | |
|---|
| ID | 4644734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5642905 |
|---|
| End bp | 5643654 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639808743 |
|---|
| Product | putative CoA transferase beta subunit |
|---|
| Protein accession | YP_956045 |
|---|
| Protein GI | 120406216 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.249131 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCTCCG CAACCCGCGC CGAGGTGTGC GCCGTCGCCT GTGCCGAATT GTTCCGCGAC
GCAGGCGAGA TCATGGTCAG CCCGATGACG ACCATCGTGT CGATCGGAGC CCGGCTGGCC
CGGCTGACGT TCTCCCCCGA CATCGTGCTG ACCGACGGTG AGGCCCGACT GATCGCCGAC
ACCCCGGCCA TCGGTGCCGC CGCGACGATC GAGGGCTGGA TGCCCTTCGG CCGGGTCTTC
GAGACGCTGG CCTGGGGTCG TCGGCATGTG GTGATGGGCG CCAACCAGAT CGACCGCTAC
GGCAACCAGA ACCTGTCCGC GTTCGGTCCG CTGCAGCACC CGACGCGCCA GATGTTCGGC
GTGCGCGGGG CGCCAGGCAA CACCATCAAC CACCCCACCA GCTACTGGGT GGGCAACCAC
TCCAAGCGGG TGTTCGGCAC TGAAGTCGAC ATCGTGTCCG GGATCGGTTG GGACAAGGTC
GATCCCGACA ATCCGGCGTA CCGGTTCGTC AACGTCTACC GGGTGGTGAC CAACCTCGGC
GTGTTCGACT TCAACGGCCC CGACCATCAG ATGCGCGCGG TGTCGCTGCA CCCCGGCGTC
GAGCCAGACC AGGTCGCCGA GAACACCTCG TTCGAGGTGC ACGGCCTGGC CGAGGCCGAG
ACGACCCGGC TGCCGTCCGG TGACGAGCAG AAGCTGCTGC GTGAGGTCAT CGACCCGAAG
TCGTTGCGCG ACAAGGAAGT AAAGGTATGA
|
|---|
| Protein sequence | MISATRAEVC AVACAELFRD AGEIMVSPMT TIVSIGARLA RLTFSPDIVL TDGEARLIAD
TPAIGAAATI EGWMPFGRVF ETLAWGRRHV VMGANQIDRY GNQNLSAFGP LQHPTRQMFG
VRGAPGNTIN HPTSYWVGNH SKRVFGTEVD IVSGIGWDKV DPDNPAYRFV NVYRVVTNLG
VFDFNGPDHQ MRAVSLHPGV EPDQVAENTS FEVHGLAEAE TTRLPSGDEQ KLLREVIDPK
SLRDKEVKV
|
|---|
| |