| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_5193 |
|---|
| Symbol | |
|---|
| ID | 4645710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5558833 |
|---|
| End bp | 5559678 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639808668 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_955970 |
|---|
| Protein GI | 120406141 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.312689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.137011 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCACCT ACGCGATCAC CGGATCGGCG TCTGGGATGG GCGCAGCCGC AGTGGCCCGA
CTGCGGGCCG ACGGCCACAC CGTGATCACG GTGGACATCA AGGACGCCGA CGTCGTCGCG
GACCTGTCCA CGTCCGACGG CCGGGCGGCC GCCGCCGCGC AGGTGCTCAC CGCATGTGAC
GGGCGCCTCG ACGGCGCCGT GCTGGCAGCG GGACTGGGAC CGAGCCAGGG CGCCGAGCGG
CTCCGCATGA TCGCCACGGT CAACTACCTC GGCGTCGTCG AGCTGCTGGA ACGGTGGCGA
CCCGCGCTGG CCGCTGCGGC GAACGCCAAA GTCGTTGTCA TCGGCAGCAA CTCGACCACC
ACCACACCGG CGGTGCCGGC CCGCGCGGTG CGCGCACTGC TGGCCGGAGA CGTCGACAAG
GCGCTGCGGG CCACCCGGCT GTACGGACCC GGGCGGCCCG CGATGGTCTA CGCCGCCTCC
AAGATCGCCG TCACCCGCTG GGCGCGGCGC CATGCCGTGC GACCCGAGTG GGCGGGCGCC
GGGATCCGGC TCAACGTGCT GGCACCGGGC GCCGTCATGA CACCGCTGCT GCAGGAGCAG
CTGGACAACA AGCGGCAGGC CAGGTTCGTC GAACGATTCC CGGTGCCGGT GGGCGGCTAC
GGGCAACCCG AGCAGCTCGC CGAGTGGATG CGCTTCATGC TCTCCGATGC AGCCGACTTC
CTCTGCGGCA GTGTCATTTT CGTCGACGGA GGCACGGACT CGCTGTTCCG TCGCGACGAC
TGGCCGCGCC CGGTCCCGGC GCGCCGGATC ATCGGTTACG TCCAGCGGTT CCGCGGCCGA
GGCTGA
|
|---|
| Protein sequence | MGTYAITGSA SGMGAAAVAR LRADGHTVIT VDIKDADVVA DLSTSDGRAA AAAQVLTACD
GRLDGAVLAA GLGPSQGAER LRMIATVNYL GVVELLERWR PALAAAANAK VVVIGSNSTT
TTPAVPARAV RALLAGDVDK ALRATRLYGP GRPAMVYAAS KIAVTRWARR HAVRPEWAGA
GIRLNVLAPG AVMTPLLQEQ LDNKRQARFV ERFPVPVGGY GQPEQLAEWM RFMLSDAADF
LCGSVIFVDG GTDSLFRRDD WPRPVPARRI IGYVQRFRGR G
|
|---|
| |