Gene Mvan_5187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5187 
Symbol 
ID4645704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5552475 
End bp5553368 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content68% 
IMG OID639808662 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_955964 
Protein GI120406135 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0325788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG GCTTCATCGG CCTGGGGAAC ATGGGCTCGG CGATGGCCGC GAACCTGTTG 
TCGGCGGGTC ACGAAGTGTT GGCCTACAAC AGATCCCGCG ACAGGGTCGT GGCGCTCGCC
GAGCGTGGAG CGACGCCAGT ACCGACGGTC GCGGCCGCAT GTGAAGGCGA CGTCGTGTTC
ACGATGCTCG CCGACGACAC CGCCGTCGAG TCGGTGACAT TCGGCGACAC CGGCATCGTC
GCTGCGCTTG CGCCCGGGGC CATCCATGTC TCCGCCAGCA CGATCAGCGT GGCTCTGTCG
GAAAAGCTCA CCGCGGCACA CGCCGAGGCC GGCCAGATGT TCGTGTCGGC GCCCGTGTTC
GGCAGGCCGG AGGCTGCTGC GGCGGCCAAG TTGTTCGTCG TCGCCGCCGG CCCACACGAC
GCGGTGACTT CACTGCAACC GGCGTTCGAA GCGATCGGGC AACGCACGTA CGTGATGTCG
GAGGAACCGA AAACCGCCAA CCTGGTGAAG TTGTCCGGCA ATTTCCTGAT CGCGTCGGTG
ATCGAATCGC TCGGTGAGGC GATGGCCCTC GTCAGCAAGG CCGGCGTCGA CAGGCAGACG
TACCTGGAAT TGCTGACGTC GACGTTGTTC GCCGCGCCTG CGTACCAGAC TTACGGCGGG
CTGTTGGCCC GCAAGCAGTT CGAGCCGGCC GGCTTCGCGG CCCACCTCGG CCTCAAGGAT
GTGCGCCTGG TGCTGGCCGC CGGCGAACAG CTCGAGGTGC CGTTGCCGGT CGCCAGCTTG
ATCCGGGACC GCTTCCTCAC CTTGCTCGCC GGAGGCGGGC GGGACCTGGA CTGGTCGGCG
CTGGGCGCGC TGGCCGACTG GGAGGCTGGC GGGCCCAGGC CCGGATCCGG CTGA
 
Protein sequence
MKIGFIGLGN MGSAMAANLL SAGHEVLAYN RSRDRVVALA ERGATPVPTV AAACEGDVVF 
TMLADDTAVE SVTFGDTGIV AALAPGAIHV SASTISVALS EKLTAAHAEA GQMFVSAPVF
GRPEAAAAAK LFVVAAGPHD AVTSLQPAFE AIGQRTYVMS EEPKTANLVK LSGNFLIASV
IESLGEAMAL VSKAGVDRQT YLELLTSTLF AAPAYQTYGG LLARKQFEPA GFAAHLGLKD
VRLVLAAGEQ LEVPLPVASL IRDRFLTLLA GGGRDLDWSA LGALADWEAG GPRPGSG