Gene Mvan_5080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_5080 
Symbol 
ID4644716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5445598 
End bp5446125 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content70% 
IMG OID639808550 
Productchorismate mutase 
Protein accessionYP_955857 
Protein GI120406028 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01806] chorismate mutase, putative 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGC TGCTGCCGTT GTTCGCCCCG GCCGCTGCGG CACAGCCCCA AACCACCCTG 
GTCGACCTCG TGGACGCCGC CACCCGGCGG CTGCAGGTCG CCGAGCCCAT CGCCGCCAAC
AAGTTCCACA CCGGCGGGCT GATCGAGGAC CCGGTGCGTG AACAACAGGT CCTCGATGCG
GTGTCCGCCG AGGCCACAGC CCTGGATCTG GACCCGGCCT ACGTGACGAC GGCGTTCCGG
GACCAGATCG ACGCCACCGT GGCGATCGAG TACAGCCGGC TGGCGCAATG GAAATTCGAC
CCCGCCACGG CGCCGGTCGA CGCACCCGAT CTGGCGTCGT CGCGCGGGAT CATCGACGCC
CTCAACCGCG AGATGGTCAC GCTGATGGCC GACGAGTGGG ACAAGCTGCA TGCGCCGACG
TGCCGGGCCG AACTCGACCA GGCCAAGGCG ACGGTCGCCG CGCAGCGTGG GCTCGACCCG
CTCTACCGGC AGGCCGTCGA CCACGCCACC CGCAACTACT GCCGCTGA
 
Protein sequence
MAALLPLFAP AAAAQPQTTL VDLVDAATRR LQVAEPIAAN KFHTGGLIED PVREQQVLDA 
VSAEATALDL DPAYVTTAFR DQIDATVAIE YSRLAQWKFD PATAPVDAPD LASSRGIIDA
LNREMVTLMA DEWDKLHAPT CRAELDQAKA TVAAQRGLDP LYRQAVDHAT RNYCR