| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4962 |
|---|
| Symbol | |
|---|
| ID | 4648290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 5307748 |
|---|
| End bp | 5309121 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639808433 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_955740 |
|---|
| Protein GI | 120405911 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC TCGACAACCA GCCCGAAATC GACGCGGCCG AGGAGCTGTC CGAGTCGATG
ACCATCCCGG TCGAGGCGTA CATCTCCGAG GAGTACGCCC GCGCCGAACG GGACAGACTG
TGGCGCAAGG TGTGGCAGCA GGTGGGCCGC GTCGAAGAGA TCCCGGAGGT CGGCAGCTAC
CTGACCTACG ACATCCTCGA CGACTCGATC ATCGTGGTAC GAACGGGCGC GGACACCTTT
GCGGCACACC ACAACGTCTG CATGCACCGG GGCCGCCGCC TGGTCGACAC CCCCGAGGGA
TGCAAGAACG CCGTCGGTCG CGCGCGGAAG TCCTTCGTGT GCGGATTCCA CGGTTGGACA
TACGGTTTGG ACGGCACCTG CACCCACATC CGCGAGCAGG ACGACTGGAA GGGCAAGCTG
ACCCCGCGCA ACACCCATCT GGCGCCGGTG CGGGTCGACA CCTGGGGCGG CTGGCTGTTC
GTCAACATGG ACCCCGACTG TGAACCGCTG GCCGACTACC TGTTCCCGGC CGCCAAGATC
CTCGACCCGT TCGGCCTGGA GAACATGCGC TACAAGTGGC GCAAATGGCT CTACTTCGAC
TGCAACTGGA AGGTGGCGCT GGAGGCCTTC AACGAGACCT ACCACGTCTT CACCACGCAT
CCGGAGTTCA ACCGGTTCGG TGAGTTCAAG GGCTGGGCCA AGGCGCAGGG CAAACACAGC
AACATCGGCT ACGACGCGCC CAAGGGGATG GACGAGACCA AGTCCAAGAT CCGTCTCGGC
ACCGGAGATC CGCGCATCTC GACCGCCGAG ATGCAGGTCT ACACCATGGA AGAGACCAAC
GCGACCACCA CCGAGACGCT GGTGAACGCC GCCAAACGGC TGGTCGACGA ACTACCCGAG
GGCACGCCCG CCGACCAGGT GCTGCAGCAC TGGCTGGCCT CGGCGCGACG CGACGACGAA
GCCCGCGGCG TGATCTGGCC GACCATCCCG CCCGACATCC TGGGCCAGAG CGGGACGGCG
TGGCAGATCT TCCCGAACTT CCAGATCGGC CAGGGCCTGA CCAGCGCGCT GTGCTACAGC
GCGCGTCCCG ACCCGAGCTA CGACCCGAAC AAGTGCATCT TCGAGGTCGC CGTGTTCGAG
CTGTATCCGA AAGGTGGGGA GCCCGAGACG GAATGGGTGT ACACGCCGAA GGATTCGCCG
AACTGGTTGT CGGTGCTGCC GCAGGACTTC TCCAACATGG CGGCCGTGCA GCAGGGCATG
AAGTCGGCGG GCTTCCCCGG CACGCTGCCC AACCCGTACC GCGAACGCAG CACCGTCAAC
CTGCATCACC AACTGTCCAA GTACATGGGA ACCGGCGAAC CCCGCGAGCT GTAG
|
|---|
| Protein sequence | MTDLDNQPEI DAAEELSESM TIPVEAYISE EYARAERDRL WRKVWQQVGR VEEIPEVGSY
LTYDILDDSI IVVRTGADTF AAHHNVCMHR GRRLVDTPEG CKNAVGRARK SFVCGFHGWT
YGLDGTCTHI REQDDWKGKL TPRNTHLAPV RVDTWGGWLF VNMDPDCEPL ADYLFPAAKI
LDPFGLENMR YKWRKWLYFD CNWKVALEAF NETYHVFTTH PEFNRFGEFK GWAKAQGKHS
NIGYDAPKGM DETKSKIRLG TGDPRISTAE MQVYTMEETN ATTTETLVNA AKRLVDELPE
GTPADQVLQH WLASARRDDE ARGVIWPTIP PDILGQSGTA WQIFPNFQIG QGLTSALCYS
ARPDPSYDPN KCIFEVAVFE LYPKGGEPET EWVYTPKDSP NWLSVLPQDF SNMAAVQQGM
KSAGFPGTLP NPYRERSTVN LHHQLSKYMG TGEPREL
|
|---|
| |