Gene Mvan_4956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4956 
Symbol 
ID4648941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp5300364 
End bp5301578 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content69% 
IMG OID639808427 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_955734 
Protein GI120405905 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.439071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG AATCTGAAGA TCAGCGCGAC AATCCGACTG ATTCTCAGTC ACAAGCTCAG 
TTTCGACAGC AGGTCCGGGC CTGGTGCCGC GATCACATCC CAGCCGACTG GCGTGACACC
CAGACCGGGG TCGGCGACGA GGAGTTCGTC CGCTTCCAGA AGGCGTGGTT CGCCGAGCTG
CACAGCGCCG GGTATGCGGT GCCGCACTGG CCGGCCGAGT GGGGTGGAGG ACTCCCCGTG
GACCGGCAGG TGGTGCTGTA CCAGGAGCTG GCCGCCCACG ACGCGCCCCG CCTGGTCCTC
GCCTTCGTCG GGATCCACCA CGCCGCATCG ACCCTGCTTG TCGCGGGCAC CGACGAGCAG
CGCAGGCGGC ACCTGCCCGC GATCCTCGAC GGCGAGATCT GGGTGCAGGG CTTCTCCGAA
CCCGAAGCGG GCTCGGATCT GGCGGCGCTG CGCACCACGG CGCGCAGGGC GGGTGACGAG
TTCGTGGTCA ACGGGCAGAA GCTGTGGGCC AGCGGCGGCA TGCACGCCGA CTGGTGCCTG
CTGCTGGCCC GCACCGACCC GGATGCGCCC AAACGCCCCG GTGCTCGAAA AAGCGCAGGC
ATCTCGTACT TCCTGATGGA CATGACCACC CCCGGGGTCG ACGTACGCCC GATCCGCAAC
GCGATCGGCG ACTCGCACTT CTGCGAGATC TTCCTCGACG ACGTCCGCAT CCCCGCCGCC
AACCTGATCG GCGCCGAGAA CAACGGGTGG CAGGTCGCAC AGGCGACGTT GGGTGCGGAA
CGGGGGCTGA CGATGCTCGA GCTCGCCGAA CGGCTCGGCA ACGCCGGATT CCGGTGGCTG
GTGCAGTCCG CACCTGTCGA CGACCCGATA GTCGCCGACC GGCTGGCCGG CTTCGAAACC
GAGATCACCG GTTTGCGGGG ACTGTGCAGG CAGATCGTCG AACGCGGCGC GACCGGCCCG
GCCGACGCGT CGGTCGTCAA GCTGTACTAC AGCGAGCTGC TGCAGCGCCT CACCGACTTC
GCCGTGGAGA TCGGCGGACC CGAGGCCCAC ACCGTGCTGG CCAAGCCGAT GTCGAGCGGA
TGGGAATCCG GTTCCTGGGT ACTGGATTTC GTCGGTTCCT GGGAGTGGAC GATCCCCGGC
GGCGCCAGCG AGATCCAGCG CACCATCATC GCCGAACGCG GGCTGGGGCT GCCTCGGGAA
CCGGGTGCGG CGTGA
 
Protein sequence
MTAESEDQRD NPTDSQSQAQ FRQQVRAWCR DHIPADWRDT QTGVGDEEFV RFQKAWFAEL 
HSAGYAVPHW PAEWGGGLPV DRQVVLYQEL AAHDAPRLVL AFVGIHHAAS TLLVAGTDEQ
RRRHLPAILD GEIWVQGFSE PEAGSDLAAL RTTARRAGDE FVVNGQKLWA SGGMHADWCL
LLARTDPDAP KRPGARKSAG ISYFLMDMTT PGVDVRPIRN AIGDSHFCEI FLDDVRIPAA
NLIGAENNGW QVAQATLGAE RGLTMLELAE RLGNAGFRWL VQSAPVDDPI VADRLAGFET
EITGLRGLCR QIVERGATGP ADASVVKLYY SELLQRLTDF AVEIGGPEAH TVLAKPMSSG
WESGSWVLDF VGSWEWTIPG GASEIQRTII AERGLGLPRE PGAA