| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_4734 |
|---|
| Symbol | |
|---|
| ID | 4648993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | + |
|---|
| Start bp | 5067493 |
|---|
| End bp | 5068440 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639808203 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_955514 |
|---|
| Protein GI | 120405685 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.897259 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATTGC GCCAGCTCGA GGCATTCGTC GCGGTGGCGG GTGAACTGCA CTTCGGACGG
GCCGCCGAGA AACTGCACAT CGGTCAACCG ACGCTGAGCG AGTTGATCCG TCGTCTGGAG
CGCGAGGTCG GGACACCGCT GCTGACTCGA ACTACGCGCC GGGTGGCGCT GACCCAGGCA
GGGGTCGAGT TGTTCGGCCG CGCCAAGGTG ATCCTCGACG ACGTCGAAGG AGCCGCCGCG
GCGGTGCGGC GGCTCGCCGA CGGCGAGGCG GGCACCGTCC GGCTGGGCAT CACCCCACCC
GTCGCTCCGG TCCTTGCGCC CCACCTGTCC CAGGCGCTGC ACAGCGCCGC TCCTGACGTT
CAGCTCGTCG TCCAACGAAT GTGGTTGCCG GATCTGCAGC GCGCGATCGG TGACGGCGAG
CTGGACGTCG CGATCACCTG CGGTCCGGTG GCCGACCCGC CCGGCATCCT CAGCGAGGTG
TTCTGCGCCG AGCCGGTGAT GGTCGGGCTC CGGGCCGATC ACCACCTCGC CGGACGCGAC
GCGGTGGAGC TGCGCAATCT GTCGACGGAG ACGATCGGCG TCCACAGCGA GGCGCTGTTC
CCGGCGTGGT CGCTGGCCCT GCGGCAGGTT CTTGACGACA CCGGGATCCG CCCGCCGGCA
GTCGAATTCA CCGACACCGA TCTGGCGGCG TACCGGTGGC CCATCCAGTC CGAGGTGGAC
TGGGTGCTCA CCACCGCGGC GGTGGCGGGT GACAGCGCCG GCGTGGTGTT GCGGCCCACC
TCACCGGCTC ACTTCGTGCC TTACACATTG CAGTGGTGTC CGATCCGCGC GACGACGGTG
GCGGTCGGCC GATTTGTGCG CCTGGCACTC TCCGTCGACG TGCCCCCGGG CTGGGTGAGC
CAACCCGACC ACCTTCGGCA CGGGGCGGGC TCACTCCTGG AGGATTAG
|
|---|
| Protein sequence | MELRQLEAFV AVAGELHFGR AAEKLHIGQP TLSELIRRLE REVGTPLLTR TTRRVALTQA
GVELFGRAKV ILDDVEGAAA AVRRLADGEA GTVRLGITPP VAPVLAPHLS QALHSAAPDV
QLVVQRMWLP DLQRAIGDGE LDVAITCGPV ADPPGILSEV FCAEPVMVGL RADHHLAGRD
AVELRNLSTE TIGVHSEALF PAWSLALRQV LDDTGIRPPA VEFTDTDLAA YRWPIQSEVD
WVLTTAAVAG DSAGVVLRPT SPAHFVPYTL QWCPIRATTV AVGRFVRLAL SVDVPPGWVS
QPDHLRHGAG SLLED
|
|---|
| |