Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4710 |
Symbol | |
ID | 4648969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | + |
Start bp | 5047201 |
End bp | 5048088 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639808180 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_955491 |
Protein GI | 120405662 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.621154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACATTGG ATTCCTTCGC GCAGTCAGCG GTGCACTCGG CATTCCTCGA GGGCCGTCCG CGGTTGCTGT CTCTGGCGCA CCGACTGCTC GGTTCGGCGC ACGACGCCGA GGACGCGGTG CAGACCGCAT GGCTGCGCGT CGCGGCGACG CCCGGGCCCC GCGACATCGC CAACCCGTCG GCCTGGCTGA CGACGGTGGT CACCAGGGTG TGTCTGGACC AGTTGCGGGA CCGGAGCCGG CGGGATGTGC TGAGCCGCCG GGTGCAGCCC GTCCAGACGG TGGCGTACGC CGCGGACGAG GAGTTTCTGC ATCGCGAAGA CGTCGCGCGC GCGTTGATGG TGCTACTCGG CCGGCTGACC CCCGCCCAGC GGGCGGCCTA TGTGCTGCAT GACCTGTTCG CGGTGCCGTT CGACCGGGTC GCCGACATCC TCGGGGTGAC GCCGGCCGGC GCGAAGAAGC ATGCGAGCCG GGCCCGGGCC CGGCTGCGGC CGGTCGAGCC GCCGTCCACC GGCGCACCGG GCGACGCCGT CGACCGCGAG GTCGTCGACG CCTTTCTGCG CGCCGCCGGG GGCGGGGACA TTGTGCGGAT GGTCGCGTTG ATGGCACCCG ACGCCGTGCG CATCGTCGAT CCCGAGTTGC TGCCCACCGG AACGGCGGCG GTGGTCACCG GCGCCACCGC GATCGCCGAG GAGACGCGTC ACTTCGCCGA CCGCATCCGC GCCAGCGTGC GGATGCGGGT CAGCGGCCGC GAGGCCCACA TCATCGCTCC CGGTGGACAT CCGTTGGGCA TCATCGACAT CCGGTGCAGC GGTGGCCTGA TCACCGGCAT CACCATCACG CCCGTCTGCG CCGCCGATGT TCTCGAACCG GCGGCTCAAC CTGCCTGA
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Protein sequence | MTLDSFAQSA VHSAFLEGRP RLLSLAHRLL GSAHDAEDAV QTAWLRVAAT PGPRDIANPS AWLTTVVTRV CLDQLRDRSR RDVLSRRVQP VQTVAYAADE EFLHREDVAR ALMVLLGRLT PAQRAAYVLH DLFAVPFDRV ADILGVTPAG AKKHASRARA RLRPVEPPST GAPGDAVDRE VVDAFLRAAG GGDIVRMVAL MAPDAVRIVD PELLPTGTAA VVTGATAIAE ETRHFADRIR ASVRMRVSGR EAHIIAPGGH PLGIIDIRCS GGLITGITIT PVCAADVLEP AAQPA
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