Gene Mvan_4498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4498 
Symbol 
ID4645537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4833275 
End bp4833937 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID639807968 
ProductTetR family transcriptional regulator 
Protein accessionYP_955279 
Protein GI120405450 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.1303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.37719 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCAG CCGATGACCT GACCGCGGCA GCCCGGATCC GCGATGCCGC CATCGACCTG 
TTCGGCCGCG ACGGATTCGC CGTCGGGGTG CGATCCATCG CCTCCGCCGC GGGCGTCAGC
CCCGGCCTGG TGATCCACCA CTTCGGCTCC AAGGACGGCC TGCGCAAGGC GTGTGACGAC
TTCGTCGCCG AGACGGTGCG GGCCAGCAAG AGCGAGGCGA TCCAGTCCTC CGATCCGGCG
ACGTGGCTTG CCCAGATTGC CGAGATCGAG GAGTACGCCC CACTGATGGC CTACCTGGTG
CGTACCCTGC AGACTGGCGG CGAGCTGGCA AAGATGTTGT GGCAGAACAT GATCGACAAT
GCCGAGCAGT ACATCGAAGA AGGCGTGCGG GCCGGCACCG TTAAGCCCAG CGCGGACCCG
AGGGGCCGGG CGCGCTTCCT GGCGATGGCC GGCGGCGGCG GTTTCCTGCT GTACCTGCAG
ATGCACGACA ACCCGACCGA TCTGCGGGCG GTCCTGCGCG ACTACAGCGA GGAGATGGTG
CTGCCCGCCC TGGAGCTCTA CACCAACGGA CTGATGACCG ACTCGACGAT GTACGACGCC
TTCGTCGCCA GACGCGCGCA GGGCATTCCG TTCACTTCGA CAGAAGGAGC GCACGATGAC
TGA
 
Protein sequence
MRSADDLTAA ARIRDAAIDL FGRDGFAVGV RSIASAAGVS PGLVIHHFGS KDGLRKACDD 
FVAETVRASK SEAIQSSDPA TWLAQIAEIE EYAPLMAYLV RTLQTGGELA KMLWQNMIDN
AEQYIEEGVR AGTVKPSADP RGRARFLAMA GGGGFLLYLQ MHDNPTDLRA VLRDYSEEMV
LPALELYTNG LMTDSTMYDA FVARRAQGIP FTSTEGAHDD