Gene Mvan_4339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4339 
SymbolprfA 
ID4647334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4653205 
End bp4654278 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content69% 
IMG OID639807810 
Productpeptide chain release factor 1 
Protein accessionYP_955122 
Protein GI120405293 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0216] Protein chain release factor A 
TIGRFAM ID[TIGR00019] peptide chain release factor 1 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0776399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGA CCGCACCGGC GATCGAGGCG ATTCTTGCTG AATACGGTGA GCTGGAGCAG 
CGCCTCGCCG ATCCCGAACT GCACGCCGAC CCGGCCGCCG CCAAGAAGGT CGGCCGCCGT
TTCGCGCAGA TCTCGCCGAT CGTGTCGACG TACCACAAGC TCGAGGCCGC CCGTGGCGAC
CTCGAAGCGG CACGGGAACT AGCCGCCGAC GACGCGTCGT TCGCCGCCGA GGTCGACGAG
CTCACGACCA AGGTCGCCGA CCTCGACGAC CGCCTGACCG ACCTGCTGGC GCCGCGCGAT
CCGCACGACG CCGACGACAT CGTGCTCGAG GTCAAATCCG GGGAGGGCGG CGAGGAGTCC
GCGCTGTTCG CCGCGGATCT GGCCCGGATG TACATCAGGT ACGCCGAGCG ACACGGCTGG
ACGGTCACGA TGCTGGGGGA GACGACCTCC GATCTCGGCG GCTACAAGGA CGCGACGCTG
TCGATCGCCG GCAAGGGTGA CTCCGCCGAC GGGGTGTGGT CGCGGCTGAA GTTCGAAGGC
GGCGTGCACC GGGTGCAGCG GGTGCCGGTC ACCGAATCCC AGGGTCGGGT GCACACCTCG
GCGGCCGGGG TGCTGGTCTA CCCCGAGCCC GACGAGGTCG AGCAGGTCCA GATCGACGAG
TCCGACCTGC GCATCGACGT CTACCGGTCC TCGGGCAAGG GCGGCCAGGG CGTCAACACC
ACCGACTCCG CGGTCCGCAT CACGCACCTA CCCACCGGCA TCGTCGTGAC CTGCCAGAAC
GAGCGCTCAC AGCTGCAGAA CAAGGCGCGC GCCATGCAGG TGCTGGCGGC GCGGCTGCAG
GCCCTGGCCG AGGAGCAGGC GTCGGCCGAC GCCTCGGCCG ACCGCGCCAG CCAGATCCGG
ACCGTGGACC GCAGCGAACG GATCCGTACC TACAACTACC CCGAGAACCG GATCGCCGAC
CACCGGATCA ACTACAAGTC GCACAACCTC GACCAGGTGC TCGACGGCGA CCTCGATCCG
CTGTTCGACG CGCTGGCCGC AGCCGACAAG CAAGCCCGGC TGCAGAACAC GTGA
 
Protein sequence
MTETAPAIEA ILAEYGELEQ RLADPELHAD PAAAKKVGRR FAQISPIVST YHKLEAARGD 
LEAARELAAD DASFAAEVDE LTTKVADLDD RLTDLLAPRD PHDADDIVLE VKSGEGGEES
ALFAADLARM YIRYAERHGW TVTMLGETTS DLGGYKDATL SIAGKGDSAD GVWSRLKFEG
GVHRVQRVPV TESQGRVHTS AAGVLVYPEP DEVEQVQIDE SDLRIDVYRS SGKGGQGVNT
TDSAVRITHL PTGIVVTCQN ERSQLQNKAR AMQVLAARLQ ALAEEQASAD ASADRASQIR
TVDRSERIRT YNYPENRIAD HRINYKSHNL DQVLDGDLDP LFDALAAADK QARLQNT