Gene Mvan_4252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4252 
Symbol 
ID4648960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4561373 
End bp4562113 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID639807719 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_955035 
Protein GI120405206 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTTC ACGGCAAGGT CGCGTTCGTC GCCGGCGCCA GCCGCGGCAT CGGCGCCACC 
GTGGCGGCGG CGCTGGCACG CGCGGGCGCG TCGGTGGCCG TGGCAGCCCG CTCCGAACAG
GAGGGCAAGC TTCCCGGCAC CATCGGCTCT GTCGCACAAG GCATCTCCGC TGCCGGCGGC
CGCGCGCTGC CGGTGGCGTG CGACGTCACC AGTGAGGAGT CCGTCAACGC CGCGGTCGCC
GAGACAGTGG CCGAGTTCGG GGGCATCGAC ATTCTCGTCG CCAACGCCGG GGTGCTGTGG
CTCGGGCCGA TCGAGACGAC GCCGCTGAAA CGGTGGCAGC TGTGCCTCGA CGTGAACACC
ACTGGCGTCT TCCTGGTCAC CAAGGCCGTC ATACCGCATG TCCGGGCACG CGGCGGCGGC
TCGTTGATCG CGGTGACCAC CACCGGCGTC AACATGACCG ACCACGGCGC GAACGCCTAC
TGGGTGTCCA AGGCCGCCGT CGAACGGCTC TACCTCGGCC TGGCCGCGGA CCTGAAACCG
GACAACATCG CGGTCAACTG CCTCAGCCCG TCGCGCGTGG TGCTCACCGA GGGCTGGCAG
GCCGGCGGCG CGGGCATGCA GATCCCGCCG GAGATGGTCG AGCCCCCCGA AGCCATGGCC
GACGCCGCGG TTTTCCTTGC CGGACAAGAC GCCTCGGGAA TCACGGGCAC CATCCAGCGC
TCCGAGGCCC TCACCTTCTG A
 
Protein sequence
MTLHGKVAFV AGASRGIGAT VAAALARAGA SVAVAARSEQ EGKLPGTIGS VAQGISAAGG 
RALPVACDVT SEESVNAAVA ETVAEFGGID ILVANAGVLW LGPIETTPLK RWQLCLDVNT
TGVFLVTKAV IPHVRARGGG SLIAVTTTGV NMTDHGANAY WVSKAAVERL YLGLAADLKP
DNIAVNCLSP SRVVLTEGWQ AGGAGMQIPP EMVEPPEAMA DAAVFLAGQD ASGITGTIQR
SEALTF