Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4155 |
Symbol | |
ID | 4648914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4466045 |
End bp | 4467253 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639807622 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_954938 |
Protein GI | 120405109 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.961602 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC CGCTCGACGG GATCCGCGTC CTCGAGGTCG CGATGTACGG CTTCGTTCCG TCGGCGGGCG CAGTGCTCGC CGAGTGGGGC GCCGACGTCA TCAAGGTCGA GCACGCCGTC ACGGGTGACC CGCAGCGCGG GCTGCGTCAG ACCGGCCTGC TTCGTGTCGA GGGCGACCCG AACCCGAACA TCGAGCACGC CAACCGGCTC AAGCGCAGCA TCGGCCTGGA CATGTCGGTG GCCGAGGGCA GAGAGGTGCT GCTGGAGCTC GCCCGCCGCG CGGACGTCTT CCTGACCAGC TTCCTGCCGG GCCACCGCCA GAAGTTCGGC ATCGATGTCG ACGACATCCG CGCGGCCAAC CCGAAGATCG TCTACGCGCG CGGCAGCGCG TTGGGACCCC GCGGTGAGGA GTCGGTCAAG GGCGGTTACG ACATGACCGC GTTCTGGTGC CGCGCCGGCA CCGCCGCCAC CATCACCCCG CCCGGCACCC CCGGCATGGT CGGTCCGCCC GGACCGGCCT ACGGTGACAC GATCTCCGGC ACCAACCTCG CCGGAGGTAT CGCCGCGGCG CTGCTCAAGA GGGAGCGCAC GGGAGAGCCG TCGATCGTCG ACGTGTCGCT GCTGGGCAGC GGACTGTGGG CGTTGGGCCA CACGGTGGCG CTGACCAACC ACCTCCACGA GCGGATGGAG GCCTTCCCGC CGGGAGCGCA CGGCTCACCG ATCAATCCGC TGGTCGGCCT GTATCCGACC GCAGACGATC GCTACATCTC ATTCGTGATG ATGCAGCCGA CCAAGTTCTG GGCCGATGTA TGCAGTCACA TGGATCTCGA CGAGCTGGTC GACGACCCGC GGTTCGCCAC CGCTGAATCG ATCGCCGAGA ACACCGCAGA CGCGGCGGAG ATCCTCAAAG AGGCGATGAG CAAGCGCACG CTGGCCGAGT GGAGCGAGCG CTTCGCGACG CTGGCCGGGC CATGGGCGCC GGTGCAGGAC ACCCTGCAGG CGGCCGAGGA CGCCCAGGTC CGCGCCAACG AATATCTGGT CCAGGCAGGC GAACTCGAGC TGGTGGCCAA CCCGGTCCAA TTCGACGTCG CCGCGCCGGC GTCGGGGCCG GCACCCGGTT TCGCCGAGCA GACCGACGAT ATTCTCGTCG AACTCGGACT GGACTGGGAC CGCATCATCG AGCTCAAGAC TGCCGGCGCG GTCACCTGA
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Protein sequence | MSKPLDGIRV LEVAMYGFVP SAGAVLAEWG ADVIKVEHAV TGDPQRGLRQ TGLLRVEGDP NPNIEHANRL KRSIGLDMSV AEGREVLLEL ARRADVFLTS FLPGHRQKFG IDVDDIRAAN PKIVYARGSA LGPRGEESVK GGYDMTAFWC RAGTAATITP PGTPGMVGPP GPAYGDTISG TNLAGGIAAA LLKRERTGEP SIVDVSLLGS GLWALGHTVA LTNHLHERME AFPPGAHGSP INPLVGLYPT ADDRYISFVM MQPTKFWADV CSHMDLDELV DDPRFATAES IAENTADAAE ILKEAMSKRT LAEWSERFAT LAGPWAPVQD TLQAAEDAQV RANEYLVQAG ELELVANPVQ FDVAAPASGP APGFAEQTDD ILVELGLDWD RIIELKTAGA VT
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