Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mvan_4078 |
Symbol | |
ID | 4649290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium vanbaalenii PYR-1 |
Kingdom | Bacteria |
Replicon accession | NC_008726 |
Strand | - |
Start bp | 4370871 |
End bp | 4371680 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639807543 |
Product | TetR family transcriptional regulator |
Protein accession | YP_954861 |
Protein GI | 120405032 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.152777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACCC GTGGAGCCGG TCCCGAGCGC AGTAGTGCCG GCGACCCGGT TCGGACGCTG AAACTGTTGT GGCGAACGCC GGGTGAAGCG CGAACCAGCC GCGGCCCCAG GCAGCGCACC ACCGTCGATG CGGTGGTGGC CGCGGCGATC GAGATCGCCG ACGCCGACGG TCTCGGCGCG GTGACCATCC GCGCGGTCGC CACCCGTCTG GGCATCGCGA CCATGGCCAC CTACACCTAC GTTCCCGGCA AGGCCGAACT CCTCGACCTG ATGCTCGACA CCGTCTACCG ACAGATGCCA CGTCGTGATC TGAGCGGGAT GGCTTGGCGC GACAGGGTTT CCGCGATCGC CGGGGAGAAC CGCGAGCTGC TCGAACAGCA CCCGTGGGTC GCCCAGCTGG CGACCACCAG GCCCCCGCTG GGGCCGGGGA TGATCGCCAA GTACGAACAC GAGCTGTGTG CGTTCGACGG ACTCGGCCTC AGCGACCTCG ACATGGACTC GGCGTTGACC TATGTGCTCG GGTTCGTGAT GTCGGTGGCC CGCATCGCGA TCGACACCAA CGCTGCGCGC GCCGACAGCG GCGTCACCGA CGACACCTGG TGGGAGCAGG CCGGGCCGGT GCTGGCGACG GTGTTCGACG CCGACGAGTT CCCGCTGGCA GCGCGGGTGG GCGAGGCCGC AGGCCGGGCC CTCGGCGGGG CCTACAACGC CGAACACGCC TACCGGTTCG GGCTGGCCCG GGTCCTCGAC GGACTGGCCC CCGTGATCGG TGACCGGGCG CGGGGATCCG GGCGGTCACC GGCAAACTGA
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Protein sequence | MVTRGAGPER SSAGDPVRTL KLLWRTPGEA RTSRGPRQRT TVDAVVAAAI EIADADGLGA VTIRAVATRL GIATMATYTY VPGKAELLDL MLDTVYRQMP RRDLSGMAWR DRVSAIAGEN RELLEQHPWV AQLATTRPPL GPGMIAKYEH ELCAFDGLGL SDLDMDSALT YVLGFVMSVA RIAIDTNAAR ADSGVTDDTW WEQAGPVLAT VFDADEFPLA ARVGEAAGRA LGGAYNAEHA YRFGLARVLD GLAPVIGDRA RGSGRSPAN
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