Gene Mvan_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMvan_4078 
Symbol 
ID4649290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium vanbaalenii PYR-1 
KingdomBacteria 
Replicon accessionNC_008726 
Strand
Start bp4370871 
End bp4371680 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content70% 
IMG OID639807543 
ProductTetR family transcriptional regulator 
Protein accessionYP_954861 
Protein GI120405032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.152777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCC GTGGAGCCGG TCCCGAGCGC AGTAGTGCCG GCGACCCGGT TCGGACGCTG 
AAACTGTTGT GGCGAACGCC GGGTGAAGCG CGAACCAGCC GCGGCCCCAG GCAGCGCACC
ACCGTCGATG CGGTGGTGGC CGCGGCGATC GAGATCGCCG ACGCCGACGG TCTCGGCGCG
GTGACCATCC GCGCGGTCGC CACCCGTCTG GGCATCGCGA CCATGGCCAC CTACACCTAC
GTTCCCGGCA AGGCCGAACT CCTCGACCTG ATGCTCGACA CCGTCTACCG ACAGATGCCA
CGTCGTGATC TGAGCGGGAT GGCTTGGCGC GACAGGGTTT CCGCGATCGC CGGGGAGAAC
CGCGAGCTGC TCGAACAGCA CCCGTGGGTC GCCCAGCTGG CGACCACCAG GCCCCCGCTG
GGGCCGGGGA TGATCGCCAA GTACGAACAC GAGCTGTGTG CGTTCGACGG ACTCGGCCTC
AGCGACCTCG ACATGGACTC GGCGTTGACC TATGTGCTCG GGTTCGTGAT GTCGGTGGCC
CGCATCGCGA TCGACACCAA CGCTGCGCGC GCCGACAGCG GCGTCACCGA CGACACCTGG
TGGGAGCAGG CCGGGCCGGT GCTGGCGACG GTGTTCGACG CCGACGAGTT CCCGCTGGCA
GCGCGGGTGG GCGAGGCCGC AGGCCGGGCC CTCGGCGGGG CCTACAACGC CGAACACGCC
TACCGGTTCG GGCTGGCCCG GGTCCTCGAC GGACTGGCCC CCGTGATCGG TGACCGGGCG
CGGGGATCCG GGCGGTCACC GGCAAACTGA
 
Protein sequence
MVTRGAGPER SSAGDPVRTL KLLWRTPGEA RTSRGPRQRT TVDAVVAAAI EIADADGLGA 
VTIRAVATRL GIATMATYTY VPGKAELLDL MLDTVYRQMP RRDLSGMAWR DRVSAIAGEN
RELLEQHPWV AQLATTRPPL GPGMIAKYEH ELCAFDGLGL SDLDMDSALT YVLGFVMSVA
RIAIDTNAAR ADSGVTDDTW WEQAGPVLAT VFDADEFPLA ARVGEAAGRA LGGAYNAEHA
YRFGLARVLD GLAPVIGDRA RGSGRSPAN