| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_3527 |
|---|
| Symbol | |
|---|
| ID | 4649217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 3751413 |
|---|
| End bp | 3752993 |
|---|
| Gene Length | 1581 bp |
|---|
| Protein Length | 526 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639807004 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_954328 |
|---|
| Protein GI | 120404499 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.678303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCAA TGTCGCTGGC CCGGATCGCC GAGATCGTCG GCGGCCGCCT GGCCGACGTG
TCCGACGAGG ATGCGGCCCG CACCGTGGTG ACGGGCACCG TCGAGTTCGA CTCACGGGCG
GTGACGCCCG GTGGCCTCTT CCTGGCGTTG CCCGGTGCCC GCTCCGACGG CCACGACTTC
GCGGCCACGG CGGTGGCGGC GGGTGCCGTC GGGGTGCTGG CGGCCCGCCC CGTCGGCGTG
CCTGCGGTCG TCGTCGACCC GGTGCGGCCG GACCCCGCTG CGCCCGGCAC GGCCGGTGTG
CTCGAACACG ACGTCGACGG CTCGGGCGCA GCGGTGCTCG CGGCGCTCGC GCGGCTGGCG
TCTGCGGTCG CCGCCGAGCT CGTCGCCGGC GGGTTGACGA TCATCGGCAT CACCGGCTCG
TCGGGCAAGA CGTCGACCAA GGACCTGATC GCCGCGGTGC TCGCGCCCCT CGGGGAGGTG
GTCGCACCGC CGGGCTCGTT CAACAACGAG CTGGGCCACC CGTGGACGGT GCTGCGGGCC
ACCCGGTCCA CCGATTACCT GGTGCTGGAG ATGTCGGCCC GCCACCCCGG CAACATCGCC
GCGCTGGCCC GCATCGCTGT GCCGTCGATC GCGGTCGTCC TCAACGTGGG CACCGCCCAC
CTCGGGGAAT TCGGCTCCCG TGAGGTCATC GCGGCTACGA AATCAGAACT GCCGCAATCA
GTTCCGGAAT CCGGCGTGGT GATCCTGAAC GCCGACGACC CCGCCGTCGC CGCGATGGCC
GACAAGACCG CGGCCCGCGT CGTGCGGGTC GGGCGCGGGG CCGAGGCGCT CGACGTGTGC
GCCGACGGGG TCAGCCTCGA CGCGCTGGCC AGGCCCAGTT TCACGCTGCA CACAGGCGCA
GCCGACGTTC CGGTCACGCT GGCCGTGCAC GGCGACCACC AGGTGTCCAA CGCGCTGTGC
GCGGCGGCCG TCGCACTCGA GTGCGGGGCC ACCCCGGAGC AGGTCGCCGC AGCCCTGGCC
ACGGCGGGCC CGGTGTCGCG GCACCGCATG CAGGTCACCG CGCGCGAGGA CGGCGTGACG
GTCATCAACG ACGCCTACAA CGCCAACCCG GACTCGATGC GCGCGGGGTT GAAGGCACTG
GCATGGATGA GTCGGGGTGG CGCGTCCAAA GGTCGCAGTT GGGCGGTGCT GGGGGAGATG
GCCGAACTCG GCGACGACGC GATAACCGAA CACGACCGCA TCGGCCGACT GGCGGTGCGC
TTAGATGTCT CTCGACTCAT CGTCGTCGGA TCCGGGAGGC CTATGAGCGC CATGCTGCAC
GGGGCGGTGA TGGAAGGGTC GTTCGGCTCT GAGGCGATCC CGGTCGCCGA CACCGACGCC
GCACTGGAGA TCCTGCGCGC CGAGCTGCGG CCCGGCGACG TGGTGCTGGT GAAGGCCTCC
AACTCCGCGG GCCTGGGCGC GCTGGCCGAC GCTCTGGTCT CCGACGTCGC CCGCGACGGT
GTCTCCGACG TCGCCCGCGA CGGTGTCTCC GACGTCGCCC GCGACGGTGT CTCCGAACCG
CCCCGCGATG GTGGCCGATG A
|
|---|
| Protein sequence | MIAMSLARIA EIVGGRLADV SDEDAARTVV TGTVEFDSRA VTPGGLFLAL PGARSDGHDF
AATAVAAGAV GVLAARPVGV PAVVVDPVRP DPAAPGTAGV LEHDVDGSGA AVLAALARLA
SAVAAELVAG GLTIIGITGS SGKTSTKDLI AAVLAPLGEV VAPPGSFNNE LGHPWTVLRA
TRSTDYLVLE MSARHPGNIA ALARIAVPSI AVVLNVGTAH LGEFGSREVI AATKSELPQS
VPESGVVILN ADDPAVAAMA DKTAARVVRV GRGAEALDVC ADGVSLDALA RPSFTLHTGA
ADVPVTLAVH GDHQVSNALC AAAVALECGA TPEQVAAALA TAGPVSRHRM QVTAREDGVT
VINDAYNANP DSMRAGLKAL AWMSRGGASK GRSWAVLGEM AELGDDAITE HDRIGRLAVR
LDVSRLIVVG SGRPMSAMLH GAVMEGSFGS EAIPVADTDA ALEILRAELR PGDVVLVKAS
NSAGLGALAD ALVSDVARDG VSDVARDGVS DVARDGVSEP PRDGGR
|
|---|
| |